| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1881 |
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| Symbol | |
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| ID | 6160291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2032379 |
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| End bp | 2033155 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664643 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001790913 |
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| Protein GI | 171058564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0796453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTCG ATTCGCATTG CCACCTGAGT TTTCCCGAGC TGAGCGCCCG CCTGGGCGAG
ATCCGCGCGC AGATGCAGGC GGCCCAGGTC GACCGCGCGC TGTGCATCTG CACCACGCTC
GAAGAGTTCG ACGGCGTGCA TGCGCTGGCG CTGGCGCACG ACAACTTCTG GGCCACGGTC
GGCGTGCACC CCGACAACGA GGGTGTGCGC GAGCCCGCGC TCGACGACCT GCTGACGCTG
GGCGCCCAAC CGCGCGTGCT GGCGATCGGC GAGACCGGGC TCGACTACTA CCGCATCGGC
GAGCGCAGCC ACGCCGACAT GGAGTGGCAG CGCGAGCGCC TGCGGGTGCA TGTGCGCGCG
GCGCGTCGAC TGCACAAGCC GCTGGTGATC CACACCCGCA GCGCCTCGGC CGACACGCTG
GCGATCCTGC GCGAGGAGGG CGCCGAGCAG TGCGGGGGTG TCTTCCACTG CTTCACCGAA
ACCCGCGAGG TGGCGGCGGC CGCGCTCGAG ATGGGCTTTC ACGTGTCGTT CTCCGGCATC
CTGACCTTCA AGAACGCCGG CGACCTGCGC GAGGTGGCCG CGATGGTGCC GCTCGATCGC
TGCCTGATCG AGACCGACAG CCCCTACCTG GCGCCGGTGC CCTACCGCGG CAAGCTCAAC
ACGCCGGCCC TGGTGCCTTA CGTGGCCGCC GAACTGGCGC GGGTCAAGGG CGTGAGCGTC
GAGGAGATCG CGCAGGCCAC CAGCGCGAAC TTCGATCGCC TGTTCAAGCC GGTCTGA
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| Protein sequence | MFVDSHCHLS FPELSARLGE IRAQMQAAQV DRALCICTTL EEFDGVHALA LAHDNFWATV
GVHPDNEGVR EPALDDLLTL GAQPRVLAIG ETGLDYYRIG ERSHADMEWQ RERLRVHVRA
ARRLHKPLVI HTRSASADTL AILREEGAEQ CGGVFHCFTE TREVAAAALE MGFHVSFSGI
LTFKNAGDLR EVAAMVPLDR CLIETDSPYL APVPYRGKLN TPALVPYVAA ELARVKGVSV
EEIAQATSAN FDRLFKPV
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