| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1852 |
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| Symbol | |
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| ID | 6163374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2003411 |
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| End bp | 2004172 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664614 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790884 |
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| Protein GI | 171058535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCTCG TGCCTGCGCT CGAACTGCTC GACGTCCACA AGCGCTTCGG TGCGACCGGG
ATCATCCGCG GCGCCCGGTT GCAGGTGCGC GCGGGCGAGC GGGTGGCGAT CATCGGCCCG
AACGGCGCGG GCAAGTCGAC GCTGTTCAAC CTGATCAGCG GCCGGCTGGC GCCCGACCGC
GGCGAGATCC GCCTGCACGG CCAGCGCATC GACGGCCTGG CGCCGCATCA GGTCAATCGC
CGCGGGCTGG CGCGCAGCTT CCAGGTCAGC AACCTGTTCG CGCGCCTGAG CGCGTTCGAG
AACATCCGCT GCGCCGTGCT CTGGAGCCTG GGCTACCGCT ACACCTTCTG GCGTTTCCTG
GCCGACCTGC GCGATGCCAA CCAGCGCGCC GACGCCGTGC TGGCGCAGAT CGGCCTGGCC
CGGCGCCGTG ACGTGCCGGC GATGAACCTG ACGTATGCCG AGCAGCGCGC GCTCGAGATC
GGCATCACCA TCGCCGGCGG CGCGCCGGTG GTGCTGCTCG ACGAGCCCAC CGCCGGCATG
AGCCGCAGCG AAACACAGCG CTGCGTGCAG CTGATCCGCG AGGTCACGGC CGGCCGCACG
CTGCTGATGG TCGAACACGA CATGGCGGTG GTGTTCGAGC TGGCCGACCG CATCGCGGTG
CTGGTGCACG GCGAGGTGAT CGCCTTCGAC ACCCCCGCGG CGGTGCGCGC CGATGCGCGC
GTGCAGGCGG CCTACCTCGG CGCGGGGAAT GCGCATGCTT GA
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| Protein sequence | MSLVPALELL DVHKRFGATG IIRGARLQVR AGERVAIIGP NGAGKSTLFN LISGRLAPDR
GEIRLHGQRI DGLAPHQVNR RGLARSFQVS NLFARLSAFE NIRCAVLWSL GYRYTFWRFL
ADLRDANQRA DAVLAQIGLA RRRDVPAMNL TYAEQRALEI GITIAGGAPV VLLDEPTAGM
SRSETQRCVQ LIREVTAGRT LLMVEHDMAV VFELADRIAV LVHGEVIAFD TPAAVRADAR
VQAAYLGAGN AHA
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