| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1851 |
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| Symbol | |
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| ID | 6163373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2002116 |
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| End bp | 2003414 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664613 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001790883 |
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| Protein GI | 171058534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACT TGCGGCCGCT CAAGCGCCAC CGCGGCTGGA TCCGGCTCGC GATGTGGGGC
GCTTATGCGG CGCTGATGCT GGCCGCGCCG CTGCTGTGGC GCAGCAGTTT CGCGCTGACG
ATGCTGTCGC AGATGGGTAT CGCGATCATC GTCTGCCTGG CCTACAACGT CCTGCTCGGC
CAGGGCGGCA TGCTGAGCTT CGGCCATGCG GTCTACAGCG GGCTGGGAGC CTATCTGGCG
ATCCACACGC TCAACCGGGT GGCCGCCGGC GATCTGGCCC TGCCGGTCAG CCTGGTGCCG
CTGGCCGGTG GTGCGGCCGG GCTGTTGTTT GCGGCACTGC TCGGTTACGT GACCACACGC
AAGGCCGGCA CCTCGTTCGC GATGATCACG CTGGGCATCG GCGAGCTGGT GTGGTCGCTG
GCGCTGATGC TGCCGGAGTT CTTCGGCGGC GAAGGCGGCA TCAGCGCCAA CCGGGTGGTC
GGCCCGCCGG TGCTGGGCAT CAGCTTCGGG CCGCAGATCG AGCTCTATCA CCTGATCGCG
ATCTACTGCT TCATCTGCAC CGCCGCGCTC TACGCGTTCA CGCGCACGCC TTTGGGGCGC
ATCCTCAATG CGGTGCGCGA CAACCCGGAG CGGGTCGAAT TCATCGGCTA CAGCACCCGT
TCGGTGCGTT GGCTGGCGTT CATGGTGTCG GGCCTGTTCG CCGGCATCGG CGGCGGGCTG
GCGGCGCTGA ACTTCGAGAT CGTCACCGCC GAGGTGCTGG GTGCGGCGCG TTCGGGCGCC
TATCTGCTGT TCGTCTTCCT GGGCGGCGCG GGGTTTTTCG TCGGCCCGAT CATCGGCGCG
GTGCTGATGG TGATCGCGCT GGTGCTGCTG TCGGAGCTGA CCGCCGCCTG GCTGCTCTAC
CTCGGGCTGG TCTTCGTGGT GATGGTGGTG GCCGCACCCG GGGGCATCGC CAGCCTGGTG
ATGGCGAACG GGCGGATCGT CGCGGCCGGA CAGATGCGGG CGCTGCTGGG CGGCTACCTG
GCGCTGGGCG GCAGCGCGCT GGCGGCGCTG GCGGGTGGCT CGGTGCTGAT CGAGATGCTC
TACCACCGCC AGCTCGACGC CGCCGCACCG GGCCCGACGC TGAACCACCT CGGCGTCGCG
CTCGACGTCA CGAGCGTCGA CAGCTGGATC GGCGCGGCCT GGCTCACGCT GGTCGGCGCC
GGCCTGTTCG AGCTGTGCCG GCGGCCGTTC GCGCGCCAGT GGCAGGCCGC GCAGCTGGCG
ATCGAGGACC AGATCCGGCG CCGCGGGGAG CTGCCGTGA
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| Protein sequence | MTDLRPLKRH RGWIRLAMWG AYAALMLAAP LLWRSSFALT MLSQMGIAII VCLAYNVLLG
QGGMLSFGHA VYSGLGAYLA IHTLNRVAAG DLALPVSLVP LAGGAAGLLF AALLGYVTTR
KAGTSFAMIT LGIGELVWSL ALMLPEFFGG EGGISANRVV GPPVLGISFG PQIELYHLIA
IYCFICTAAL YAFTRTPLGR ILNAVRDNPE RVEFIGYSTR SVRWLAFMVS GLFAGIGGGL
AALNFEIVTA EVLGAARSGA YLLFVFLGGA GFFVGPIIGA VLMVIALVLL SELTAAWLLY
LGLVFVVMVV AAPGGIASLV MANGRIVAAG QMRALLGGYL ALGGSALAAL AGGSVLIEML
YHRQLDAAAP GPTLNHLGVA LDVTSVDSWI GAAWLTLVGA GLFELCRRPF ARQWQAAQLA
IEDQIRRRGE LP
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