Gene Lcho_1756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1756 
Symbol 
ID6160321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp1884429 
End bp1885187 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID641664518 
Producthypothetical protein 
Protein accessionYP_001790788 
Protein GI171058439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0474826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTG CGAGCATCAA CGAGATCCAC CGCCGCAAGA CCGGCAAGGT CAGCGACAAG 
TGGGCGTCCT ACCTGCCGTA CTACGACCAG CTGTTCGCAC CGCTGCGCGA GCAGCCGATC 
CAGCTGCTGG AAATCGGCGT GCAGAACGGC GGCTCGCTCG AGACCTGGGC CGAATACTTC 
GGTGCCGCGA CGACGCTGAT CGGCTGCGAC ATCGACCCCA AGTGCGCCGG CCTGCGCTAC 
ACCGACCCGC GGGTGCAGAT CGTGGTGGGC GACGCCAACC AGCGCCCGGC CTTCCAGGCC 
ATCACCGCCA TCACGACCGC GCTCGACGTG GTGATCGACG ACGGCTCGCA CGTCTCGCGC 
GATGTCATCA ACTCCTTCAT CAACTACTTC CCGCTGCTGC AGCCCGGCGG CATCTACGTG 
GTCGAGGACG CGCACTGCCT CTACATGGAT GCCTACGGTG GCGGCGTGCT CAACGAGTAC 
GGCGCCTATG CCTTCTTCAA GCGCCTGGTC GACATCGTCA GCTTCGAGTT CTGGGAGAAC 
GACCTGGGCA TCGCGCCGTT CCTGCGCACC TTCTTCGAGG CGCGTGCCGT GCCGGCCTTC 
ATCGGGCAGG GTTGGATCGA ATCGGTGGAG TTCCGCAACT CGATCATCAC CATCCGCAAG 
GCTCAGTCGC CCACGCACAA GAAGCTCGGC GAGCGCCTGA CGGTGGGCGA CCAGACGCTG 
GTGCAGGACT GGGGCGGCAA CCGCCCGGGC GCGGCCTGA
 
Protein sequence
MSFASINEIH RRKTGKVSDK WASYLPYYDQ LFAPLREQPI QLLEIGVQNG GSLETWAEYF 
GAATTLIGCD IDPKCAGLRY TDPRVQIVVG DANQRPAFQA ITAITTALDV VIDDGSHVSR 
DVINSFINYF PLLQPGGIYV VEDAHCLYMD AYGGGVLNEY GAYAFFKRLV DIVSFEFWEN 
DLGIAPFLRT FFEARAVPAF IGQGWIESVE FRNSIITIRK AQSPTHKKLG ERLTVGDQTL 
VQDWGGNRPG AA