| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1712 |
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| Symbol | |
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| ID | 6162237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1829886 |
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| End bp | 1830644 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664472 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001790744 |
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| Protein GI | 171058395 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000000576973 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTCGA CCCCGACCCC GCTCGTGCAG GTGCAGGCCC TGGCCCTGCG CCACGGCGAG
TTCACGGTCC AGCGCGATCT CGACTTCGAC GTGCGCCGCG GCGAGGTCTT CGTCATCGCC
GGCGCCAGCG GCTGCGGCAA GAGCACGCTG CTGCGCCACC TGATCGGCCT GCAGCCGCCG
GCGGCCGGTC GGGTACTGCT CGACGGCGAC GACCTCTACG TCGGCGACGA CCACCGCCTG
GCCGCGCTGC GCCGGCGCTT CGGCGTGATG TTCCAGGCCG GCGCGCTCTG GAGCTCGATG
ACGGTGGGCG AGAACCTGAT GCTGCCGATG CGCCTGCACA CCACGCTGTC GCCGGCGGCG
CAGCGCCAGC AGGCGCAGTT CAAGCTCGCG CTGGTCGGGC TCGACGGCTG TTTCGACCTC
GAACCGGCGG CGCTGTCGGG CGGCATGCGC AAGCGTGCGG CGATCGCGCG CTCGCTGGCG
CTCGACCCGG CGCTGCTGTT TCTCGACGAG CCCAGCGCCG GCCTCGACCC GGTAAACGCC
GCCCGCCTCG ACGAGCTGGT GCTCAAGTTG CGCGACCATC TGGGCACCAC GGTGGTGATG
GTCACGCACG AGATCGACAG CGTGTTCGCC GTCGCCGACC GTTTGCTCTA CCTCGACGAA
CAGGAAAAGA CCATGACCGC GCTCGACGCC CCGCAGACCC TGCTCGACCA CGGCCCGCCG
CGGGTGCGCG AGTTCCTGCA GCGAGGCCAT CTGCGATGA
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| Protein sequence | MRSTPTPLVQ VQALALRHGE FTVQRDLDFD VRRGEVFVIA GASGCGKSTL LRHLIGLQPP
AAGRVLLDGD DLYVGDDHRL AALRRRFGVM FQAGALWSSM TVGENLMLPM RLHTTLSPAA
QRQQAQFKLA LVGLDGCFDL EPAALSGGMR KRAAIARSLA LDPALLFLDE PSAGLDPVNA
ARLDELVLKL RDHLGTTVVM VTHEIDSVFA VADRLLYLDE QEKTMTALDA PQTLLDHGPP
RVREFLQRGH LR
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