Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1711 |
Symbol | |
ID | 6162236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1828773 |
End bp | 1829882 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641664471 |
Product | hypothetical protein |
Protein accession | YP_001790743 |
Protein GI | 171058394 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000000795041 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGTCG ACTTGAACGG CCACGAGTGG CGCCAGGACG GCGCCGGCTG GACGCTGATC CTGCGCGGCG ACTGGTGCGG TGACGCCGGC ACCCGGCTCA CGCCGCCCCC CGCGGCGGCG CGGCAGGTCA GCGTCGACGC CCGTGCGCTC GGCGCCTGGG ACGGTGGCCT GGCCGCCGCG CTGCACCAGT GCCTGGCACC GCTGCACCAG CGCGCCGTGC CGCTGCAGCT GCAGGACTTG CCGCCGGGCG TTCGCAGCGT GCTGGAGCTG GCGCTGTCGG TGGTGCGGGT GTCGGCGCCC GAGCGTGCGG CCGCGCCGGT CGGGGTGGCC GCGATCGGCC ACCGGCTGGC GATTTCGTGG GTCGAATGCA TGGCCACGGC GGCGTTTTTC GGCGAGGTGC TGATCGCGCT GGGCCGGCTG CTGCGCGGGC GCAGCGACCT GCAGGGTGTC GACCTGTGGC GCCAGGTCGA CCAGGCCGGG CCGCTGAGCG TGCCGATCGT CTCGCTGACC TGTTTCCTGG TCGGCCTGAT GCTGGCCTAC ATGGGCGGCG CCCAGCTGCA CCGCATCGGC GCGCCGTCCT TCATCCCCGA CGTGGTGACA GTGGGCATGG TGCGCGAGCT CGCCGGGCTG ATGACCGGCG TGATCCTGGC CGGCCGGCTG GGCGCGGCGT TTGCGGCCCA GATCGGCAGC ATGCAGGCCG GCGAGGAGAT CGACGCGCTG CGCGCCCTGG GCGTCGACCC GATCGGCTAC CTGGTGCTGC CGCGCCTGCT GGCGCTGCTG CTGGTGGCGC CGATGCTGGT GGCCATCGGC ATGCTGGTGG GCGTGCTGGC CGGTCTGCCC GCGGCGGTGG CGGCCTATGG CCTGTCGCCG ACCGAGTACC TGCACAAGAG CGCCGCCGCG CTGACCTGGA CCCACCTGTG GATCGGCCTC TTCAAGGGCA TGATGTACCT CGGCCTGGTG GCGCTGGCGG GCTGCCGCGA GGGCCTGCGT GCCGGCCGCG ACGCCCAGGC CGTGGGTGCG GCCACCACCA CTGCGGTGGT CAAGGCGCTG GTCTGGATCG TGGCGGCGGC CTGCGGCTCG ACCGTCGTGC TGCAGAGCCT GGGCTTCTAG
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Protein sequence | MGVDLNGHEW RQDGAGWTLI LRGDWCGDAG TRLTPPPAAA RQVSVDARAL GAWDGGLAAA LHQCLAPLHQ RAVPLQLQDL PPGVRSVLEL ALSVVRVSAP ERAAAPVGVA AIGHRLAISW VECMATAAFF GEVLIALGRL LRGRSDLQGV DLWRQVDQAG PLSVPIVSLT CFLVGLMLAY MGGAQLHRIG APSFIPDVVT VGMVRELAGL MTGVILAGRL GAAFAAQIGS MQAGEEIDAL RALGVDPIGY LVLPRLLALL LVAPMLVAIG MLVGVLAGLP AAVAAYGLSP TEYLHKSAAA LTWTHLWIGL FKGMMYLGLV ALAGCREGLR AGRDAQAVGA ATTTAVVKAL VWIVAAACGS TVVLQSLGF
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