Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1651 |
Symbol | |
ID | 6161511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1760323 |
End bp | 1761243 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641664405 |
Product | ApbE family lipoprotein |
Protein accession | YP_001790683 |
Protein GI | 171058334 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGTCCG GCGTGTCGGT CGCACCGCTC GTCGAGCCGA CCGCCGACGG CTGGCGCGTC GCCTTCGCGG CGATGGCCAG CCCCTGCGAA CTGCTGCTGC AAGGCGGCGA CGCGGCCCTG GCGCGCCGGC TCGGCGAGAT CGCGCACGGT GAGGCGCAGC GCATCGAGCA CAAGTTCAGC CGCTACCGCG ACGACAGCGT GCTGGCGCGC CTGCATGCGA GCGCCGGCGA GGCGGTCGAG GTCGATGCCG AAACCGCCGA CCTGCTCGAC TTTGCCGCCC ATTGCCACGC GCTCAGCGGC GGGCTGTTCG ACATCACCAG CGGCGTGTTG CGGGCGGCCT GGCGCTTCGA CGGCTCCGAC CGCCTGCCCG ACCCGGCGCA GGTGACGGCC TTGCTCGGGC AGGTCGGCTG GCCGCGCCTC CAGTGGCAGC GGCCGTGGCT GACGCTGGCG CCGGGCATGC AGATCGACCT GGGCGGCATC GGCAAGGAAT ACGCGGTCGA CCGCACGCTC GGCCTGCTGC GTGCGCAGAC CGGGCTGCCG GTGCTGGTGA ACTTCGGCGG CGACCTGATC GTCAGCGGGC CGCGCCTGGA TGCGGCCGGC CAGCCGCGAC CCTGGCAGGT CGGCATCGAG CCACCGGATC GGCCGTCGGC GTCACGCGTG CCGGCGATCG TGCTGCTGCA CGGCGGCGCG CTGGCCACCA GCGGCGACGC CCGCCGCTTT CTGCTCAAGG ACGGCGTGCG CTACGGCCAC GTGCTCGATC CGCGCACCGG CTGGCCGGTG CCGGGCACGC CGCGTTCGGT CACGGTGGCG GCGCCGACCT GCACCGAGGC CGGCCTGCTC AGCACGCTGG CGCTGCTGCA GGGCGCGCAG GCCGAGGCGT TCCTGCAGGC GCAGGGCGTG CCGCACTGGG TGTTGAACTG A
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Protein sequence | MPSGVSVAPL VEPTADGWRV AFAAMASPCE LLLQGGDAAL ARRLGEIAHG EAQRIEHKFS RYRDDSVLAR LHASAGEAVE VDAETADLLD FAAHCHALSG GLFDITSGVL RAAWRFDGSD RLPDPAQVTA LLGQVGWPRL QWQRPWLTLA PGMQIDLGGI GKEYAVDRTL GLLRAQTGLP VLVNFGGDLI VSGPRLDAAG QPRPWQVGIE PPDRPSASRV PAIVLLHGGA LATSGDARRF LLKDGVRYGH VLDPRTGWPV PGTPRSVTVA APTCTEAGLL STLALLQGAQ AEAFLQAQGV PHWVLN
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