Gene Lcho_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1625 
Symbol 
ID6160957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1725793 
End bp1726275 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content70% 
IMG OID641664379 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_001790657 
Protein GI171058308 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000638353 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTGA TCGCCTGGAC CGACGACATC GCCACCCAGC ATCCGCAGAT GGATGCCACG 
CACCGCGAGT TCATCGAGCA CCTCGACCGC CTGCACGCCG CGCTCGAGCA GCCGGTGGAC 
GCGATGCTGG CGGTCTACGA CGCGATGCTG GCGCACACCG TCGAGCACTT CGCGCAGGAA 
GACCGCTGGA TGGCGGCCAC CGGTTTCGCG CCGGAAAACT GCCACAGCCG CCAGCACGGC 
CAGGTGCTCG ACGTGCTGCG CGACGTGCGC CGCCAGGTGG TCGACGACGG CCGCCGGGAA 
ATGGTGGCGC AACTGCTGCC CGAACTGACG CAGTGGTTCG AGGGCCACGC CCAGATGATG 
GACGCCGGCC TCGCCTATCA CATCGGCCAG GTCGGCTACG ACACCCGCAC CGGCACGATC 
CGCTCGCCGG TGGCCGAAGC CTCGCTGAGC GGCTGCGGCA GCACCGCCTG CTCCGACGCC 
TGA
 
Protein sequence
MTLIAWTDDI ATQHPQMDAT HREFIEHLDR LHAALEQPVD AMLAVYDAML AHTVEHFAQE 
DRWMAATGFA PENCHSRQHG QVLDVLRDVR RQVVDDGRRE MVAQLLPELT QWFEGHAQMM 
DAGLAYHIGQ VGYDTRTGTI RSPVAEASLS GCGSTACSDA