Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1523 |
Symbol | |
ID | 6161568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1609896 |
End bp | 1610369 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641664278 |
Product | signal-transduction protein |
Protein accession | YP_001790556 |
Protein GI | 171058207 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0526572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTCA GCGACATTCT GCGAGTCAAG GGCAGCACCC TGTTCACCGT GCAGCCTCAA GAGGCCCTTG CCGTGGCTGT GCAGACCATG AGCGACAACG ACATCGGCTC GCTCGTGGTG ATGCACCACG GCGACCTGGT GGGCATGCTC ACCTTCCGCG AGGTCATCGC CGCGGTGGTC AAGAACGGCG GCACCGTCGG CCAGAGCACC GTGCGCGGCG TGATGGACGA TCACCCGCTG ACCTGCACCC CCGCCACCGA GATCGACGAG GTGCGCCGCA TGATGCTCGA GCGCCATGCC CGCTACATGC CGGTGGTCGA CGGGCGAACG CTGATGGGCG TGATCTCGTT CTACGACGTC GCCAAGGCGG TGGTCGACAG CCAGGACTTC GAGAACCGGA TGCTCAAGGC CTACATCCGC GACTGGCCGG TCGAGGCCGA CGAGGGCGCC GAAGAGGTCA AGCCGGCCGC CTGA
|
Protein sequence | MKVSDILRVK GSTLFTVQPQ EALAVAVQTM SDNDIGSLVV MHHGDLVGML TFREVIAAVV KNGGTVGQST VRGVMDDHPL TCTPATEIDE VRRMMLERHA RYMPVVDGRT LMGVISFYDV AKAVVDSQDF ENRMLKAYIR DWPVEADEGA EEVKPAA
|
| |