Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1495 |
Symbol | |
ID | 6162409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1580010 |
End bp | 1581176 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641664249 |
Product | aspartate aminotransferase |
Protein accession | YP_001790528 |
Protein GI | 171058179 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00201329 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCCAAG TGATCGCCGA CCTGAGCGCC TCGCGCATCC GCGAGGTGGC CAACGCCGGC CTGGGCCGCA GCGACGTGCT GGCCTTCTGG TTCGGCGAGA GCGACGAGAT CACGCCGATC GGCGTGCGCG ATGCCGCAGT GGCGTCGATC GAGGCGGGCG AGACCTTCTA CGGCCACAAC CTGGGTCTGC CGGAGCTGCG CCAGGCGCTG GCGCGCTACG TCAGCAGTCT GCACAAGCCC GTGGGCGCCG AGCGCATCGC GGTGACGTCG TCGGGCGTGA GCGCGCTGAT GATCGCGCAG CAGGCGCTGG TCGACGCCGG CGACGAGGTG GTGGCGGTCG TGCCGGTCTG GCCGAATCTG GTCGCGCAGC CGGCCATCAT GGGTGCGCGC GTGCGCTGCA TCAGCCTGCA TCCGCGCAAC GGCGCTTGGA TGCTCGATCT GGACGAGCTG CTGGCCGCCA TCACGCCGGC CACCCGGGTG CTGATCGTCA ATGCGCCCAA CAACCCGACC GGCTGGACGC TGACTGCCGC CGAGCAACAG GCGATCCTGG ATCACTGCCG CCGCACCGGC ACCTGGATCG TGTCCGACGA GGTCTACGAG CGGCTCTATT TCCCCGATGC GGCGGATGCC GACGGTCAGG TCTGCGCGCC GAGCTTTCTC GACATCGCCG AACCCGAGGA CCGGCTGCTG GTGGTGCACA GCTTCTCGAA GAGTTTCCTG ATGACGGGCT GGCGGCTGGG TTGCCTGATC GCGCCGCCGT CGATCGTCGA GGAGCTCGGC AAGCTGATCG AGTTCAACAC CTCGTGTGTT CCGGTGTTCG TGCAGCGCGC CGGGTTGGCG GCGCTGGCCG AGGCGCCGCA GTCGGTACCG GCGCTGCAGG CGCATCTGCG GCGCTGTCGC GACACGCTGA TCGACGCCCT GCAGCCGCTG CCGGGCATCG AGCTGGCGCG CCCGCGCGGG GCAATGTATG CCTTCCTGCG GGTGCAGGGG CAGGACGACT CGCTGGCGCT GGCCAAGCGG CTGGTGGTCG AGCACGGACT GGGCCTGGCC CCGGGCGTGG CCTTCGGTCC GCAGGGCGAG GGCTGGCTGC GCTGGTGTTT CGCTTCGCGC GACCCGCAGC GCTTGCTCAA GGGTGTGGAG CGGCTGGCGC GCGCGCTGCG TCTATAA
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Protein sequence | MRQVIADLSA SRIREVANAG LGRSDVLAFW FGESDEITPI GVRDAAVASI EAGETFYGHN LGLPELRQAL ARYVSSLHKP VGAERIAVTS SGVSALMIAQ QALVDAGDEV VAVVPVWPNL VAQPAIMGAR VRCISLHPRN GAWMLDLDEL LAAITPATRV LIVNAPNNPT GWTLTAAEQQ AILDHCRRTG TWIVSDEVYE RLYFPDAADA DGQVCAPSFL DIAEPEDRLL VVHSFSKSFL MTGWRLGCLI APPSIVEELG KLIEFNTSCV PVFVQRAGLA ALAEAPQSVP ALQAHLRRCR DTLIDALQPL PGIELARPRG AMYAFLRVQG QDDSLALAKR LVVEHGLGLA PGVAFGPQGE GWLRWCFASR DPQRLLKGVE RLARALRL
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