| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1325 |
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| Symbol | |
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| ID | 6163057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1411230 |
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| End bp | 1411595 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664079 |
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| Product | LrgA family protein |
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| Protein accession | YP_001790358 |
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| Protein GI | 171058009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATCGTGC TTCGCGGGCT CGCCCTGCTG CTGTTGTTCC AGGCCGCCGG CGAGGGGCTG
ACGCATGTCT TTTCTCTGCC GTTCCCGGGC CCGGTGGTCG GGCTGGTGCT GCTGCTGCCG
GCACTGAACT GGGCGCCGGT GCGCGAGCCG GTGTCGGCCG CGGCCAACCT GCTGCTGGCC
AACCTGTCGC TGCTGTTCAT CCCGGTGGGC GTGGGTGTCA TCACGCACCT GCAGCTGGTG
TCGCAGTACG GCCTGCAGCT GGTCGCGGCG ATCGTGGGCT CGACGGTCAT CGGCCTGGCG
GTGACGGCGC TGGTGCTCGA CCGCCTGCTG CGTGGCGATG CGCAGCCGGG AGCGGGCGAT
GACTGA
|
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| Protein sequence | MIVLRGLALL LLFQAAGEGL THVFSLPFPG PVVGLVLLLP ALNWAPVREP VSAAANLLLA
NLSLLFIPVG VGVITHLQLV SQYGLQLVAA IVGSTVIGLA VTALVLDRLL RGDAQPGAGD
D
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