Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1307 |
Symbol | |
ID | 6161006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1392051 |
End bp | 1392575 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641664061 |
Product | cytochrome c class I |
Protein accession | YP_001790341 |
Protein GI | 171057992 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.466199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CTCAACACAC CCACGACGAG CACGAAAGCC CGATCAAGAC CTCCAAGCAA CTGATCGCCG CGGTGGTCTT TGCATTCATC GTGCCGATCT TTGCCATCGT GCTGCTGGTG AAGTCGGTGG CGGTCGATCC GCGCAGCGGC GCCGGCGTCG ATGCACTCGG TGCCGAGGCC ACGGCCGCAC GCATCCAGCC GGTCGGCGCC GTGACGCTCA AGCTCGAGGG CGGCCCGCTC AAGAGCGGCG AAGAAGTCTT CAAGGCGCAA TGCACCGCCT GCCACACCGC CGGCCTGGCC GGTGCACCCA AGATCGGCGA CAACGCCGCC TGGGGCCCGC GCATCGGCAC CGGCCTCGAG GCCCTGCTGA CCTCCGCGCT GAAGGGCAAG GGCGCGATGG GCGCTCAAGG CGGCGGCGAT TTCAGCGAGC TCGAGATCGC CCGCGCCGTG GTCTACATGG CCAACGCCAG CGGTGGCAAG CTCGACGAGC CCAAGGCTCC TGCCGCAGCC GCCAGCGCAC CCTGA
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Protein sequence | MSDAQHTHDE HESPIKTSKQ LIAAVVFAFI VPIFAIVLLV KSVAVDPRSG AGVDALGAEA TAARIQPVGA VTLKLEGGPL KSGEEVFKAQ CTACHTAGLA GAPKIGDNAA WGPRIGTGLE ALLTSALKGK GAMGAQGGGD FSELEIARAV VYMANASGGK LDEPKAPAAA ASAP
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