| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1212 |
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| Symbol | |
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| ID | 6160808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1296968 |
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| End bp | 1298539 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663966 |
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| Product | coenzyme A transferase |
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| Protein accession | YP_001790246 |
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| Protein GI | 171057897 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCA AGTTCGTATC GGCCGATGAC GCGGCCCTGT TGATCAATGA CGGCGACACC
GTGGCGCTGA TGGGCGGCGG CGGCGGCCTG ATGGAGGCGA CCTGCCTGTT CCAGGCGGTC
GAGCGGCGCT TCCTGGCCAC CCAGACGCCG CGCAATCTCA CGTGCGTGCA CGCGCTGGGC
ATCGGCGACA AGCAGTCGCG CGGCATGAAC TGCTTCGCCT ACGAGGGCCT GGTGCGCAAG
GTGATCGGCG GCCACTGGGT CTGGTCGCCA CGCATGCAGC AGCTCGCGCT GGACGAGAAG
ATCGAGGCCT ACATCCTGCC CGGTGGCGTG TCGTCGCAGC TGCTGCGCGA GATCGGCGGC
GCGCGGCCGG GGCTGTTCAC GCACGTCGGC CTGGGCACCG TCTGCGACCC GCGCCACGGC
GGCGGGCGCA TGAACGCGAG CGCCAAGGAT GACCTGGCCG AGGTCGTCAC GGTCGATGGC
CGCGAGTACC TGCGCTACAA GCCGTATGCG GTCAACGTCG CGCTGGTGCG CGCCTCGGCG
GCCGACGAGG ACGGCAACAT CAGCTTCGAA CACGAGGCCG CCAATCTCGA TGCCGCGTCG
ATCGCATTGG CCGCGCGCAC CAGTGGCGGC CGCGTGATCG TGCAGGTGCG CGAGCGCCTG
CCACGTGGTG CGCTCAAGGC CCGCGAGGTG CGCATCCCGG CCGCCTGGGT CGATGCGATC
GTGGTCGACG CGGATCAGCG CACCAGCTAC GACATCCCCT TCGACGCCAG CCTGAGCGGC
GAACTGACCG GCCCGCAGCG CTTCGAACTC GAAGCGCCTG GCGACGAGCC CTTCAACGAG
CGCCAGGCGG TGGCCCGGCG CGCGGCCTGC GAACTGGTCG AAGGCGCGGT CGTCAACTAC
GGCGTCGGCG TGCCCGATGC AGTGGCCAAG CTGGTGGCGC GGCGCGGCGA ACTCGACCGC
ATCTACCAGA CCATCGAACA CGGCACCTAC GGCGGCAGCC TGCTCGACGG CGTGCTGTTC
GGCTACGCCC GCAACGCCAG CGCGATGCTG GATGCGCCGA CACAGTTCGA CTTCTACGCC
GGCGGCGGGC TCGACATCGC CTTCCTCGGC TTCGGCGAGT TCGATGCGTT GGGCAACGTC
AACGTGTCGA AACTCGGCGG CCTGACGGTC GGCCCGGGCG GCTTCATCGA CATCGCCCAG
AACGCCCGCA AGGTGGTGTT CTGCGGCACC TTCGCGGCCA AGGGCGTCCA GCTCGAAACC
GGCGACGGCA CGCTGTGCGT GGTCAAGCCC GGCGAGGTGC GCAAGCTCGT GCAGCAGGTC
GACCAGGTCA CCTTCAGCGG CCCGCAGGCG CTGCTGCGCG GCCAGCAGGC GCTCTACCTG
ACCGAGCGGG CGAACTTCCG CCTGACGCCC GAAGGCATGG AGCTGTTCGA GATCGCGCCC
GGCATCGATC TGCAGCGCGA CGTGCTCGAC CAGATGGACT TCGTGCCGCG GCTGGCCGAG
AACATTGCGG TGATGCCGGC GTCGCACTTC CGACGCGAGG ACGATCGGCT GGGCGCGCTG
TCGAGCCGAT AG
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| Protein sequence | MKSKFVSADD AALLINDGDT VALMGGGGGL MEATCLFQAV ERRFLATQTP RNLTCVHALG
IGDKQSRGMN CFAYEGLVRK VIGGHWVWSP RMQQLALDEK IEAYILPGGV SSQLLREIGG
ARPGLFTHVG LGTVCDPRHG GGRMNASAKD DLAEVVTVDG REYLRYKPYA VNVALVRASA
ADEDGNISFE HEAANLDAAS IALAARTSGG RVIVQVRERL PRGALKAREV RIPAAWVDAI
VVDADQRTSY DIPFDASLSG ELTGPQRFEL EAPGDEPFNE RQAVARRAAC ELVEGAVVNY
GVGVPDAVAK LVARRGELDR IYQTIEHGTY GGSLLDGVLF GYARNASAML DAPTQFDFYA
GGGLDIAFLG FGEFDALGNV NVSKLGGLTV GPGGFIDIAQ NARKVVFCGT FAAKGVQLET
GDGTLCVVKP GEVRKLVQQV DQVTFSGPQA LLRGQQALYL TERANFRLTP EGMELFEIAP
GIDLQRDVLD QMDFVPRLAE NIAVMPASHF RREDDRLGAL SSR
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