Gene Lcho_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_1184 
Symbol 
ID6163485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1269588 
End bp1270094 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content66% 
IMG OID641663938 
ProductMarR family transcriptional regulator 
Protein accessionYP_001790218 
Protein GI171057869 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.535813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG CCAACAGGTT GTTCTTTCGG CTCTATCAAT GTGCAAACAT GTTGCACAAA 
ACCGGCTCAC GCGCCGTGGA GACGGAAGGC CTGACGACGC AGCAGTGGGC GGTGCTGGGC 
GCGCTGTCGC GCCCGCAGGC CGAGGGCGGC ATGAGCGTGG GCGACCTGGC CCGCTACCTG 
ATGGTGAGCC GGCAGAACCT GTCCGGGCTG ATCAGCCGGA TGGAGCGCGA CGGCCACCTG 
GTCAGCACCC CCGACGAGCG CGATCGCCGC TCGCGCCTGG TCACGATGAC CGAGTCGGGG 
CGGCACGTCT GGCTGGTGCA GGCGCTGCCC AAGATCCACA CGTACTACGA GCAGATCCTG 
GCGGACTTCT CGATCAACGA CATCACGCAC ACGCTGCACT ACCTGCTCAA GATGCTGGAG 
AACATGGAGC GGGTCGACGT GGAGGGCCAG GACCGCAACG GCGGCCCGGG TGACGGCGCC 
GAAGATTCGG CCGACGCAGC CGCCTGA
 
Protein sequence
MELANRLFFR LYQCANMLHK TGSRAVETEG LTTQQWAVLG ALSRPQAEGG MSVGDLARYL 
MVSRQNLSGL ISRMERDGHL VSTPDERDRR SRLVTMTESG RHVWLVQALP KIHTYYEQIL 
ADFSINDITH TLHYLLKMLE NMERVDVEGQ DRNGGPGDGA EDSADAAA