Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1149 |
Symbol | |
ID | 6164028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1230285 |
End bp | 1231307 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641663903 |
Product | membrane-bound metal-dependent hydrolase |
Protein accession | YP_001790183 |
Protein GI | 171057834 |
COG category | [R] General function prediction only |
COG ID | [COG1988] Predicted membrane-bound metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAT TGACACAACT CGTGCTGGGT GCCTCGGTGA GCATGGCGGT GATGGGCCGC GCGGCGCGGC CCGCCAAGGC CGCGGCCTGG GGCGCCCTGG CGGGCACCTT GCCCGATCTG GACGTGCTGA TCGACCAGGG CGATCCGATC CTCGACATGG TGCTGCACCG TGCCGAGTCG CATGCGCTCT TCTGGCTCAC GCTGTTTTCG CTGCCGTTTG CACTGGCCGT GGCCCGTTGG CACGGCGAGA CCGATCGATG GCGGCGCTGG TGGGCCGCGC TCTGGCTGGC GCTGGTGACC CATCCGCTGC TGGACCTGCT CACCATCTAC GGCACCCAGG TGCTGCTGCC GTTCACGAAT CAGGCCTGGG GACTGGGCAG CGTGTTCATC ATCGACCCGA TGGTCACCGT GCCCTGGGCG GTGGGCGTGG TGGCGGCGCT GCGCGCGGCC TCGCCCGAAC GCGCCCGCCG GGCCAACGTC GTGGGCCTGT CGCTCGGCCT GGCCTACCTC GGCTGGGGCG CCGCGGTGCA GCAGCACGTG CTGGCGAAGG CGCGGGATTC GCTGCGGGCG CAGGGGCTGC CGGCCGAGCA GGTGCTGGCC ACGCCGACGC CCTTCAATTC GGTGCTGTGG CGGGTGGTGT CGGTGGGCAA CGGACAGTTC CACGAGGGCT TCCACTCGCT GCTGGACGGA CCTGGGCCGA TCCGATTCGA CCGCTTCGAC CAGGGCCGGC CGCTGGCGCA GGCGTTGCAG GCCCATGACG GACTGACGCG CATCCGCAGG TTCAGCGACG GCTTCTGGGC CTTGCAGGCG CATCCGGACG GGCAGCTGCT GCTCTCCGAC CTGCGCATGG GCCAGCAGCC CCATTACGTG TTCCGCTTTG CCATCGCCCG GCGTGACGAG GCCACCGGCA CATGGTTGCC GATGGCACGC GCGGAATCGG CCGGCAGCCG CGCGCCGTTC GCGCCCAGCG TGTCGTGGCT GTGGCGCCGC ATGGGCGGCG TGCCGGTCGC ACCGCCGCGC TGA
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Protein sequence | MDSLTQLVLG ASVSMAVMGR AARPAKAAAW GALAGTLPDL DVLIDQGDPI LDMVLHRAES HALFWLTLFS LPFALAVARW HGETDRWRRW WAALWLALVT HPLLDLLTIY GTQVLLPFTN QAWGLGSVFI IDPMVTVPWA VGVVAALRAA SPERARRANV VGLSLGLAYL GWGAAVQQHV LAKARDSLRA QGLPAEQVLA TPTPFNSVLW RVVSVGNGQF HEGFHSLLDG PGPIRFDRFD QGRPLAQALQ AHDGLTRIRR FSDGFWALQA HPDGQLLLSD LRMGQQPHYV FRFAIARRDE ATGTWLPMAR AESAGSRAPF APSVSWLWRR MGGVPVAPPR
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