Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1123 |
Symbol | |
ID | 6162145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 1199345 |
End bp | 1200244 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641663877 |
Product | 2-hydroxy-3-oxopropionate reductase |
Protein accession | YP_001790157 |
Protein GI | 171057808 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.356226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG GATTCATCGG CCTCGGCATC ATGGGCGCGC CCATGGCGGG CCATCTGCTG GCCGCCGGCC ATGAACTGTT CGTGCACACC CGCAGCGCGG TGCCGGCGGC GCTGGGCGCG GCCGGTGCGG TGGCCTGCGC CAGCGGCGCC GAAGTGGCGC AGCGCGCCGA CGTGGTCTTC ACGATGGTGC CCGACACCCC CGACGTGCAG AAGGTGCTGT TCGGCGAAAA CGGCGTGGCC TCCGGTCTGA GCGCTGGGAA AACCGTCGTC GACATGAGCA GCATCTCGCC GATCGAGACC CAGGTCTTCG CCAGGCAGAT CGCCGCGCTC GGCTGCGATT ACGTCGACGC GCCGGTCAGC GGCGGCGAGG TCGGCGCCAA GGCCGCCAGC CTGACGATCA TGGTGGGCGG CAGCGAGGCG GCGTTCGCGC GCATCCAGCC GCTGCTGGCG CTGATGGGCA AGAACATCAC GCACGTGGGC GACGTCGGCG CGGGCCAGAT CACCAAGGTG GCCAACCAGA TCATCGTCGC GCTCAACATC GCCGCGGTCG GCGAGGCGCT GGTGTTCGCC AGCAAGGCCG GCGCCGATCC GGCCAAGGTG CGGCAGGCGC TGATGGGCGG ATTCGCGTCC AGCCGCATCC TCGAGGTGCA TGGCGAACGC ATGATCAAGC GCACCTTCAA CCCGGGTTTT CGCATCGGCC TGCACCAGAA GGACCTGAAT CTGGCGCTGC AGGGCGCCAA GGCGCTGGGC GTGGCGCTGC CCAGCACCGC CAACGCGGCG CAGCTGATGC AGGTGTGCGC CGCGCAGGGC TGGGATCAGC TCGACCACTC GGCGCTGGTC AAGGCGCTGG AACTGATGGC CGCGCACGAC GTGGCCGCGG CGCCCGACGC GGCTGCCTGA
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Protein sequence | MKLGFIGLGI MGAPMAGHLL AAGHELFVHT RSAVPAALGA AGAVACASGA EVAQRADVVF TMVPDTPDVQ KVLFGENGVA SGLSAGKTVV DMSSISPIET QVFARQIAAL GCDYVDAPVS GGEVGAKAAS LTIMVGGSEA AFARIQPLLA LMGKNITHVG DVGAGQITKV ANQIIVALNI AAVGEALVFA SKAGADPAKV RQALMGGFAS SRILEVHGER MIKRTFNPGF RIGLHQKDLN LALQGAKALG VALPSTANAA QLMQVCAAQG WDQLDHSALV KALELMAAHD VAAAPDAAA
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