| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1015 |
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| Symbol | |
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| ID | 6160140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1084460 |
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| End bp | 1084828 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663765 |
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| Product | flagellar hook-basal body complex subunit FliE |
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| Protein accession | YP_001790051 |
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| Protein GI | 171057702 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1677] Flagellar hook-basal body protein |
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| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATCA AGCTCAAACC CTTCGACTTC GCCCAGGCTG CCACCAAGGC CGGCATGCCG
CAGGTTGCCC AGCGGGTGCG CGAAAGCGCC CAGGCCGCCG GCCTGAGCGG CGCGGCGGGC
CCGGCCGCCA GCGGCGGCGT CGAAAAGGCG GGTTTCTCGC AGGTCTTCAG CCAGGCGCTC
AACAACGTCA GCCAGGCCCA GATGAAGGCC CAGGGCATGC AGCGCGAAGT GGCGCTGGAC
AACCCCACCG TCAGCCTCGA GGAAACCATG GTGGCGATGC AGCGCGCGCA GATCGGCTTC
CAGGCCACCC TGCAGGTGCG CAACAAGCTG GTCCAGGCCT ACAGCGACAT CATGAACATG
CAGGTCTGA
|
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| Protein sequence | MDIKLKPFDF AQAATKAGMP QVAQRVRESA QAAGLSGAAG PAASGGVEKA GFSQVFSQAL
NNVSQAQMKA QGMQREVALD NPTVSLEETM VAMQRAQIGF QATLQVRNKL VQAYSDIMNM
QV
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