Gene Lcho_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0966 
Symbol 
ID6161475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1032881 
End bp1033201 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content68% 
IMG OID641663717 
Producthypothetical protein 
Protein accessionYP_001790003 
Protein GI171057654 
COG category[S] Function unknown 
COG ID[COG5416] Uncharacterized integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA TTCACTGGAT CTTCCGCGCA GCGGTGTTCT TCGTGTTGTT CGCCTTCGCG 
CTGAACAACC AGCATGCCGT CGACCTGAAC TGGTTCTTTG GCGTGTCGAC CCATGCGCCG
ATGGTGCTGG TGGTGCTCGC CGCGTTCGCG GCCGGCTGCG TGGTCGGCGT CCTGGCGATG
CTGCCCGGCT GGTGGCGCCA GCACCGTCGT ACCCGTGCCC TCGAGGCCGC CGTGCCGCGA
TCGGCTGTCC CGCAACCTGC GACCCCCGCA GGCCAGCCCT CCGAGGCAGA ACTGCCACAT
CCCCCCCGCG ATGGACTTTG A
 
Protein sequence
MRIIHWIFRA AVFFVLFAFA LNNQHAVDLN WFFGVSTHAP MVLVVLAAFA AGCVVGVLAM 
LPGWWRQHRR TRALEAAVPR SAVPQPATPA GQPSEAELPH PPRDGL