| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0866 |
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| Symbol | |
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| ID | 6161703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 931497 |
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| End bp | 932369 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663616 |
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| Product | VirB8 family protein |
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| Protein accession | YP_001789903 |
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| Protein GI | 171057554 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGGA CCACGAATGA CGTCAGGGAC GACTTCTTCG ACAGCGACTG GCAGGCCCTG
CGTCAGTCGG ATCTGGCGCG CGATCCGGTC GACGCGGTCG AATCGGAACC GGCGCACTCG
GCGCCATCGG CCCCATCCTC ACTGCCAGCA CAGCCACCAC CACCGCCGCC CATCGAAGAC
CTCGCTTACC AAGGCAATCA GACCTGGGAG ATCGACCGCG CCCAGCTGCT CGAACGCTCC
GAACGCCGCG CCTGGCAGGT GGCCGTCGCG GCCGGCCTGC TCGCGCTGAC CGGCATCACA
GCGGTGTTCG TGCAGGGGCC GCTGCGCCGC ATCGTCGAGA TCCCCATCGT GGTCGACCGC
GTCACCGGCG AGACTACGAT CCAGCAGCGC CTGGACGTCG AGACCATTCC GACGATGGAG
GCGCTGGACA AGCACAACCT CGCCGCCTTC GTGCGGGCCC GCGAGGGCTA CAGCTGGATG
TTCCTGCAGC GCGACTTCGA CCAGGTTGCG CGCATGGCGG CGCAGCCGGT GTTCGGGGAC
TACGCGCGGC TGTTCGAAGG CGACGCGGCA CTGCAGAAGA AGCTCGGCGC CAGCGAGGAC
TGGCGCATCC GCATCGTCGG CGTGCGGCTC TCGCCGACCG GCCGCAAGGG CAACCGCGGT
GACGCCACCG TCACCTACGA CAAGGCCGTG CGGCAGACCG ACCGCAACCT GGCCGAGGTC
GTGACCCGCC ACGTCGCCAG CGTCGTCTTC CAGTACCAGC CCCAGGCGCT GAGCAAGGAA
GCCGACCGCC TGGAGAACCC CTTCGGTTTC GTCGTGACCG CCTACCGGTC CGACCCCGAG
ATCAACACCG CCGCATCGGG AGCCAAGCCA TGA
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| Protein sequence | MTRTTNDVRD DFFDSDWQAL RQSDLARDPV DAVESEPAHS APSAPSSLPA QPPPPPPIED
LAYQGNQTWE IDRAQLLERS ERRAWQVAVA AGLLALTGIT AVFVQGPLRR IVEIPIVVDR
VTGETTIQQR LDVETIPTME ALDKHNLAAF VRAREGYSWM FLQRDFDQVA RMAAQPVFGD
YARLFEGDAA LQKKLGASED WRIRIVGVRL SPTGRKGNRG DATVTYDKAV RQTDRNLAEV
VTRHVASVVF QYQPQALSKE ADRLENPFGF VVTAYRSDPE INTAASGAKP
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