| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0823 |
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| Symbol | |
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| ID | 6163384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 887123 |
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| End bp | 888046 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663573 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001789860 |
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| Protein GI | 171057511 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 106 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT TCATCACCGG CGCCGGCGGC TACATCGGCG GCTCCCTCTC GACCGCCTTG
CTGGCCGCCG GCCACCACGT GCGGGGCCTG ACGCGCGACG CGGAGACCGC CCGGCGACTG
GCCGCATCCG GCATCGAGCC CGTGATGGGC TCGATGGACG ATGCCGTTCT GCTCGCCCGC
GAGGCCGCGG GCGCCGACGG CGTGATCAAC ACGGCCAGCG CCGACCATCC GGCTGCGGTG
CAGGCCTTCA TCGCAGGGCT GGCCGGATCG GGCAAGCCGC TCCTGCACAC CAGCGGCTCC
AGCGTGATCG GCGACGACGC ACGCGGCGCA CGCCTGTCGG CGCAAGTGTT CGACGAGGAC
ACGCCTCTGG CCGTGCATCC GATGAAGCAG GCGCGTCGCG ACATCGACCT CATGGTGCTC
GGGGCGGCGG AGCGGGGCGT GCGTTCGGCG GTGATCTGTC CCAGCAACAT CTACGGCGTC
GGCCGGGGAC TCAAGCGCGA CAGCGTGCAG ATTCCATTTC TTGCCACGAA CGCCCGCCAG
CAAGGCGTGG TGCAGATCGT CGGCGCGGGT CTGAACGTCT GGTCGAACGT GCACATCGAT
GACGTCGTCG ACCTCTACCT GCTGGCGCTC GAGAAGTCAC CAGCCGGCGC CTTCTACTTT
GCCGAGAACG GCGAGGCCTC CTTCGGCGAC ATCGGTGCGG CCATCGCTCG GCGGCTCGGA
CTGCCGGGCA TCGAATCCCT GCCGGCCGAA CTGGCCGCCC AGCGCTGGGG TGAGGCGCGG
GCCTGGTTCT CGCTCGGCAG CAACAGCCGC GTGCGTTCGG CGCGTGCCCG CCGCGAGCTT
GGCTGGGTGC CTCGCCATGC CTCGGTGATC GACTGGATCG AGCGCGAGAT GCCGCTCGCT
GAACCCACTT CCCCATCTTC TTGA
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| Protein sequence | MNLFITGAGG YIGGSLSTAL LAAGHHVRGL TRDAETARRL AASGIEPVMG SMDDAVLLAR
EAAGADGVIN TASADHPAAV QAFIAGLAGS GKPLLHTSGS SVIGDDARGA RLSAQVFDED
TPLAVHPMKQ ARRDIDLMVL GAAERGVRSA VICPSNIYGV GRGLKRDSVQ IPFLATNARQ
QGVVQIVGAG LNVWSNVHID DVVDLYLLAL EKSPAGAFYF AENGEASFGD IGAAIARRLG
LPGIESLPAE LAAQRWGEAR AWFSLGSNSR VRSARARREL GWVPRHASVI DWIEREMPLA
EPTSPSS
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