| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0722 |
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| Symbol | |
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| ID | 6162959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 770218 |
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| End bp | 771324 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663474 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789762 |
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| Protein GI | 171057413 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.195254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CCCTGTCTCG CAAGCGCTTT CTTCAAGGTT CCGCCGCGGC CGTGGCCGCA
GCGCTCGTCA CCTCCCGGGA GGTCTTGGCG AACCCCGCCA CCCCTTCAAC CGCAAAGCCT
GCCATGCCGC TGACCATCGT CTGGGACAAG ACCTTCCCCA AGAGCCCCAA GGTCGATCAC
CACAAGGTGA CGTTCAAGAA CCGCTACGGC ATCACGCTGG CCGCCGACCT CTACGTGCCG
AAGAACGCCG GCGGGCGCAA GCTGGCCGCG CTCGCGGTGT GCGGCCCCTT CGGCGCGGTG
AAGGAGCAGT CCTCGGGGCT GTATGCGCAG ACGCTGGCCG AGCGAGGCTT CGCCACGGTC
GCCTTCGATC CCTCTTTCAC CGGCGAAAGC GGCGGGCAGC CGCGCAACGT CGCCTCGCCC
GACATCAACA CCGAGGACGT CAGCGCCGCG GTGGACTTCC TCGGGCTGCA GCCGCTGGTG
GACCGCGAGC GCATCGGCGT GGTCGGCATC TGCGGCTGGG GCGGCATCGC GCTCAACGCG
GTGGCGGTGG ACAAGCGTGT CAAGGCGGTG GTGGCAAGCA CCATGTACGA CATGTCGCGC
GTCATGTCCA AGGGCTACAA CGACAGCGTG ACCCCCGCGC AGCGCGCGCA GGCGCTGGAG
CAGCTGAGCC GCCAGCGCTG GGTCGATGCG GAGAAGGGCA GCCCCGCGGT CGGCCCGGTG
TCCCTCGAGC TCAAAGGCGG CGAGCCGCCC TTCGTGGTGG AGTACGCGGG CTACTACAAG
TCGCGCCGGC GCGGCTTCCA TCCGAGGGCG ATCAACTCGA ACAGCTCGTG GACGGTCACC
ACGCCGCTGT CGTTCATGAA TGCGCCGCTG ATGACCTCCA TCGCCGAGAT CGCGCCGCGG
CCCCTGCTGC TCATCCACGG CGAGAAGGCC CACTCGCGCT ACTTCAGCGA AGCCGCCTTC
GCGGCCGCGG CGCAGCCCAA GGAACTGCTG ATCATCCCCG GCGCCAACCA CGTCGATCTG
TATGACCGTC TGGACGTGAT CCCGTTCGAC AGGATGGCTG CCTTCTTCGA GACGAACCTG
AAGCCGGCTG GGGCAGGCCA TGTCTGA
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| Protein sequence | MSTSLSRKRF LQGSAAAVAA ALVTSREVLA NPATPSTAKP AMPLTIVWDK TFPKSPKVDH
HKVTFKNRYG ITLAADLYVP KNAGGRKLAA LAVCGPFGAV KEQSSGLYAQ TLAERGFATV
AFDPSFTGES GGQPRNVASP DINTEDVSAA VDFLGLQPLV DRERIGVVGI CGWGGIALNA
VAVDKRVKAV VASTMYDMSR VMSKGYNDSV TPAQRAQALE QLSRQRWVDA EKGSPAVGPV
SLELKGGEPP FVVEYAGYYK SRRRGFHPRA INSNSSWTVT TPLSFMNAPL MTSIAEIAPR
PLLLIHGEKA HSRYFSEAAF AAAAQPKELL IIPGANHVDL YDRLDVIPFD RMAAFFETNL
KPAGAGHV
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