Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0686 |
Symbol | |
ID | 6164094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 737358 |
End bp | 738347 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641663437 |
Product | putative cobalamin biosynthesis transmembrane protein |
Protein accession | YP_001789726 |
Protein GI | 171057377 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.910501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTT TCGCGGTCTT GCTGGCCCTC GTCATCGAAC AGTTGCGGCC CCTGCCGCAG GGCAATCCGG TCCATGAAGG GCTGATTGCC TGGTCGCGCT GGACCGGCTT CAACTTCGAT GCCGGCCGTG AGCACCACGC CTGGGTGGTC TGGACCGTGA CGGTCTTCGT GCCGGCGTTG CTGGTCGGGC TGGTGCACTG GGCGCTCGAC AGCTACAGCA GCATCCTGTC GCTGGCCTGG GATCTGGTCG TGCTCTACAT GACGCTCGGC TTTCGCCAGT TCAGCCACTA CTTCACCGAC ATCCGGGATG CTCTCGAGCA GGGCCAGGAG GAGCGCGCCC GTGAATTGCT GCGTGCCTGG CGCAACCTCG ACGCCAGCGA ACTGCCACGC ACCGAACTGC TGCGCCATGT GATCGAGCAC GCGCTGCTGG CGGCGCACCG CCATGTGTTC GGCGTGTTCT TCTGGTTCGT GCTGGGCTCG GCGCTCGGGC TCGGGCCGGT CGGTGCCGTG ATCTACCGGA TGGCCGAGTT CTGTGCCCGT TACTGGGCCT ACAAGAGCCG CACGCTGAGC GCGCCGACCA ACGAGCGCCT GATGCTGCGT GCGCAGCAGG CCTTCGCCCT GATCGACCAC GTTCCGGCGC GTCTGACGGC GGCAGGGTTT GCGGTGGTCG GCAATTTCGA GGAGGCGGTC GACTGCTGGC GCCACCATGC GGGGTTGTGG AAGCACTCCA ACGACGGCAT CCTGCTGGCG TCGGCAGCCG GCGCGGTCGG TCTGGCGCTC GGCGGCACCC ATGCGCCCGA ACTGATGCCC AACCGCAGCC GCGGTTTCGA TGCCGGCGCC TTGCCCGACG AGGCCGGCGC CGAAGGCAGC ACGCCCGGCG CTGCGCCGCA GCTGGCGCAC CTGCGCGCGG TGGTCGGTCT GGTCTGGCGC TCGGTGGTGC TGTGGATGCT GCTGCTGGCG CTGCTGTCGC TGGCCAACCT GCTCGCCTGA
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Protein sequence | MSFFAVLLAL VIEQLRPLPQ GNPVHEGLIA WSRWTGFNFD AGREHHAWVV WTVTVFVPAL LVGLVHWALD SYSSILSLAW DLVVLYMTLG FRQFSHYFTD IRDALEQGQE ERARELLRAW RNLDASELPR TELLRHVIEH ALLAAHRHVF GVFFWFVLGS ALGLGPVGAV IYRMAEFCAR YWAYKSRTLS APTNERLMLR AQQAFALIDH VPARLTAAGF AVVGNFEEAV DCWRHHAGLW KHSNDGILLA SAAGAVGLAL GGTHAPELMP NRSRGFDAGA LPDEAGAEGS TPGAAPQLAH LRAVVGLVWR SVVLWMLLLA LLSLANLLA
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