| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0667 |
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| Symbol | |
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| ID | 6163859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 721705 |
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| End bp | 722673 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641663418 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001789707 |
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| Protein GI | 171057358 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTG CAACCCGGCG CCAGCGCGCC GCAGCCCGTC GATCGCGGAC CAAGCTGGAC
GCCGCCCGCG CCCCGGCCGC GACACCACCC CGGCCGTTCA GGCGGTCGCG CCTGCTGATC
ATCGGCTGCG GCGACGTCGG CCAGCGCGTG GTGCGCGCCC TCGGCGGCCG CCTGCGGGTG
CGCGCCCTCA CCTCGCAAGC CGAGCGCCTG CCGGCGCTGC GCGCGCTCGG CGTCACACCG
CTGCTCGGCG ACCTCGATGA CGCCGCCAGC CTGCGCCGGC TGTCTGCGCT GTCGGGCTGG
GTGCTGCACC TGGCCCCGCC ACCCGGCGCG GGCGAGCACG ACACCCGCAC CCGTGCCCTG
CTGCACGCCT GGGCGATGGG CGGGAACGTT CGACGACTGG TCTACGCCAG CACCAGCGGG
GTCTACGGCG ATGCCGCGGG CGCGCGTTTC GATGAAACCC GGCCGACCGC GCCGGCCACT
GCGCGGGCAC GTCGCCGGGT CGACGCCGAA CAGCAGATCC GCCGCTGGGC GCGCCGCCAG
GGTGTGGCAG CCAGCATCCT GCGCATCCCC GGCATCTACG CCGGCGACCG CCCCGGCGGC
CATCCGCGCG AGCGCCTGCA GCGTGGCACG CCGGTGCTGC GCAGCGAGGA CGACGTCTAC
ACCAACCACA TCCACGCCGA CGACCTGGCG CGCATCTGCC TGGCTGCGCT GATGCGCGGC
CGGCCGCTGC GGGCCTATCA CGCCAGCGAC ACGAGCGACC TGCGGATGGG CGACTACTTC
GACCTCGCGG CCGACCTGTG CGGACTGCCA CGCCCGCGCC GCATCAGCCG CACCGACGCG
CAGCGGGAAC TCGGCCCGAT GCTGCTGAGC TTCATGAGCG AATCCAGGCG CCTGGACAAC
GCCCGCCTGC TCAACGAACT GCGGGTGCAC CTGCGGCACC CGCACGTCCG GACCGGCCTG
CTGGTCTGA
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| Protein sequence | MTLATRRQRA AARRSRTKLD AARAPAATPP RPFRRSRLLI IGCGDVGQRV VRALGGRLRV
RALTSQAERL PALRALGVTP LLGDLDDAAS LRRLSALSGW VLHLAPPPGA GEHDTRTRAL
LHAWAMGGNV RRLVYASTSG VYGDAAGARF DETRPTAPAT ARARRRVDAE QQIRRWARRQ
GVAASILRIP GIYAGDRPGG HPRERLQRGT PVLRSEDDVY TNHIHADDLA RICLAALMRG
RPLRAYHASD TSDLRMGDYF DLAADLCGLP RPRRISRTDA QRELGPMLLS FMSESRRLDN
ARLLNELRVH LRHPHVRTGL LV
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