Gene Lcho_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0615 
Symbol 
ID6160098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp662930 
End bp663547 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID641663365 
Productmaf protein 
Protein accessionYP_001789655 
Protein GI171057306 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0184201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAC CCGTTCCCCA TCTGATCCTG GCGTCGACCT CGAGGTATCG ACGCGAACTG 
CTGCAGCGTC TGCGCATGCC GTTCGACGTG GTGTCGCCCG CGACGGACGA GACACCGCTG
GCCGGCGAGC GCCCGGCGCA GTTGAGCGAG CGCCTCGCGA TGGCGAAGGC CCGGGCCGTG
GCCTGCTTGC ATCCGTCATC GATCGTGATC GGCTCCGATC AGGTGGCCGA ATGTGACGGT
GAGTCGATCG GCAAGCCGCA TGTGCACGAA CGCGCGGTCG CGCAACTGCG TCAGATGAGC
GGGCGCACGG TCGCCTTCCA TACCGCAGTG GCCGTCGTGC ACCTGGATGC CGGCTTCGCG
CGTTGTGTCC GGGTGCCGGT CGAGGTGCGG TTTCGCGCCC TCGCGGATGC CGATATCCAG
GCCTATCTGC GCCTCGAACA GCCTTACGAC TGCGCCGGCA GTGCCAAGTG CGAGACCCTG
GGCATCAGCC TGCTCGATGC GATCCGCTCG GACGACCCGA CGGCCCTGAT CGGCCTGCCG
CTGATCGCCA CCAGCGCGCT GTTGCGTGAT GCGGGTGCCG ACCCGCTTCG CTGGGCAGGA
GCTGACCGTG GGTGCTGA
 
Protein sequence
MHEPVPHLIL ASTSRYRREL LQRLRMPFDV VSPATDETPL AGERPAQLSE RLAMAKARAV 
ACLHPSSIVI GSDQVAECDG ESIGKPHVHE RAVAQLRQMS GRTVAFHTAV AVVHLDAGFA
RCVRVPVEVR FRALADADIQ AYLRLEQPYD CAGSAKCETL GISLLDAIRS DDPTALIGLP
LIATSALLRD AGADPLRWAG ADRGC