| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0511 |
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| Symbol | |
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| ID | 6162304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 554429 |
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| End bp | 555658 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663260 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001789551 |
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| Protein GI | 171057202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0138311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCGC ACGCCCGTCA CCTGTGGACC GCGCCTCGCT GGGCGCTGGC GATCCTGCTG
GCCAGCCTCG GCATGCTGGG GCCGTTCTCG ATCGACACCT ACCTGCCCGC GTTCACCGGC
ATCGCCGCCT CGGTGGGCGC CAGCCCGGTC GAGATGCAGC AGACGCTGTC GGCCTACCTG
CTCGGCTTCG CGGCCATGAA CCTGTTCCAC GGCGCGCTGG CCGATGCGCT CGGCCGCCGG
CCGGTGGTGC TGACCGGCGT GGCGGTGTTC ACGCTGGCGA GCGTGGGCTG CGCGCTGTCG
GATCACGTCG GCTGGCTGAT CGCCTTCCGC GCCTTGCAGG GCATGTCGGC CGGCGCGGGC
ATGGTGGTGT CGCGGGCGGT GATCCGCGAT CTGTTCCCGC CCGATCAGGC GCAGAAGATG
ATGTCGCAGG TGACGATCTA CTTCGGCATC GCCCCGGCGG TGGCGCCGAT GATCGGCGGC
TGGCTGTTCG TGCACCTGGG CTGGCACGCG GTGTTCTGGT TCCTGTCCGG CGTGGGACTG
CTGATCGGCC TGGGCGTCTG GCGTGCGCTG CCGGAGACGC TGCCGGCCGC GCAGCGCCAG
CGGCTCGATC TGTCGCACCT CTGGCAAGGC TATCGGGCGC TCGGCCTGGA CCGGCGCTTC
TGGCTGCTGG CGCTGGCCTC GGGGGTGCCG TTCAACGGCA TGTTCCTGTA CGTGCTGAGC
GCGCCGGCGT TCCTGGGCGA GCTGATGCGG CTTGCGCCCG ACCAGTTCTT CTGGTTCTTC
ATCGCCAACA TCGGCGGCAT CATGCTCGGC GCCTGGACCA GCGGCCGGCT GGCCGGGCGC
ATCGCCGGGT CGGTGCAGAT CCGCGCCGGC TTCGTCATCA TGAGCCTGGC CTCGGTGGCC
AACGTGGCGG CCAACCTGGT CTGGCCGCCG CACATCTCGT GGGCGCTGGT GCCGCTGTTC
TTCTACTGCC TGGGCTGGGC GATCCTGGTG CCGGTGGTGA CGCTGATGGT GCTGGATCTG
GTGCCGGCGC GGCGCGGCAT GGCGTCGTCG CTGCAGGCCA CCGTGGCCAG CACCGCCAAC
GCGCTGGTGG CGGGCGTGCT GGCGCCGCTG GTGATGCACA GCACGCTGGC GCTGAGCGTG
GCGTCGGCGC TGCTGATGAC GGTCGGGCTG GTGGCGTGGC AGTGCGTGCG GCGCAGCGTG
ATGGTTTCGC CCGGTGCGCG GCCGGACTGA
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| Protein sequence | MHAHARHLWT APRWALAILL ASLGMLGPFS IDTYLPAFTG IAASVGASPV EMQQTLSAYL
LGFAAMNLFH GALADALGRR PVVLTGVAVF TLASVGCALS DHVGWLIAFR ALQGMSAGAG
MVVSRAVIRD LFPPDQAQKM MSQVTIYFGI APAVAPMIGG WLFVHLGWHA VFWFLSGVGL
LIGLGVWRAL PETLPAAQRQ RLDLSHLWQG YRALGLDRRF WLLALASGVP FNGMFLYVLS
APAFLGELMR LAPDQFFWFF IANIGGIMLG AWTSGRLAGR IAGSVQIRAG FVIMSLASVA
NVAANLVWPP HISWALVPLF FYCLGWAILV PVVTLMVLDL VPARRGMASS LQATVASTAN
ALVAGVLAPL VMHSTLALSV ASALLMTVGL VAWQCVRRSV MVSPGARPD
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