| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0509 |
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| Symbol | |
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| ID | 6162302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 551092 |
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| End bp | 553317 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641663258 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789549 |
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| Protein GI | 171057200 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0140536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCA AGATGTGTCG CCCGCTGTGG GCGATGGCCT GCCTGCTGCT CGCCGCCCTG
CTGGCCGGGC CCGGTCTGGC CCGGGCCGCG GACGATCCGC CCGGGCGGGT CGGCCGCATC
GCCTGGATCG ACGGCGACGC CCGCCTGGCG CGCGGCGACG GCGGCGACAC GCTCGACCAC
GCGCGCGATT CGCTGCGCAA CTGGCCGGTG ACCAGCGGCG ACGAACTCAG CGTGGGCAAC
AACAGCCGGG CCGAGATCGG CATCGGCTCG ACCCGCCTGC GCCTGGGCGA AAACAGCCAG
CTGCTGCTGC GCCGGGTCGA CGACGAGCGC ATCGAGCTCG AACTGCTGGG CGGCTCGCTG
GCGGTGCTGC TCGGCAGCGA CGAAGTGGCG CGCGAACTCA GCATCGAGAC CGATGCCGCG
CGCCTGCTGC CGCTGGGCGC CGGGCTCTAC CGCATCGACG TGCCCGACGC CGAACGCGGC
CACACCCACC TGCACGCCGC CACCGCCTGG CGCAACGGCC TGCGCATCGA GCAGCCGGCC
GGCAGCTACC TGCTGCAGCC CGGCCAGCGC GCCGAGATCT ACGTCGACGG CGGTTTCCGG
CTCGACACTC CCGAGGCCGA CGGCTTCGCC CGCTGGGCCA TGAACGACGA CGACTTGCGG
CTGCAGCAGG CCTCGCGCGA CGCGCCGGTG CCCGACGAGA TGACCGGCGC CCACGAGCTC
GATCGCCACG GCGACTGGAC CCGCTCGGCC GACTACGGCT GGGTCTGGTA CCCGCGCACC
GTGGTGGTCG GCTGGGCGCC CTACCGCCAC GGCCGCTGGA GCTGGGTCTC GCCCTGGGGC
TGGACCTGGA TCGACGACGC GCCCTGGGGT TTCGCGCCCT TCCACTACGG CCGCTGGGTC
TGGTGGCGCG ACCGCTGGGG CTGGGTGCCC GGCGACCACA CGCCGCGGCC GGTCTACGCG
CCGGCGCTGG TGGTCTGGAA CGGCCAGCCG GGCCTGTCGT GGTCGATCAG CATCGGCACC
GGCGTGGCCT GGTATCCGCT CGCGCCGCGC GAGGTCTACG TGCCGGCCTA TGCCTTCAGC
CCGCGCCACG TGCGCCTGCT CAACCAGCCG CACGTGCACG ACGGCCCGCT GCTGCGCCGC
GTGATGGAAC GCCCCGACGA GGTGCTGCGC CACACGCCCT ACCGCTACCG CCAGTTCTCC
GGCGCGGTCA GCACCGGCAT CGGCCGCGAT GGCCGTGACG GCCGCTTCTT CCGCCCGGCG
CCCTGGCGCG GCGCGGTCGA GCTGCCACCA CGCATGCGCG CCCCGCAGGC GCCGCCGGTG
GTGACGCGCA TCCAGCCGCC GCAACCGCCG CGCGAGCGCT GGGAGCGCGA CCGCCGGGAT
CGCAACGAGC GCGGCGACCG GATCGACCGC GGCGATCGGT TCGATCGACC GGATCGTCAG
CCGGCACCAC CGCAGCCGGA CATGCGCCAC CACGGCGACA TCGACCGCAA CCGTCCGCCC
GGCGCCAACG CGCCACCCGC GCCGCCGCCC AACCCGTCGC AGCGCTTCGT GCCCGGGCAG
GTGCCGATCC AGCCGGGACA AGCCGCGCGC CCGCAGCCCG GCCTGGCGCA ACCGGTGGCG
CCGCAGCCCG GCGCGTCGTT CCCGGGGCTG CGCCCGCGCG ACGGCGCACG CCCCGACGGA
CGCCCCGACG CGGATCCGGA CGGCCGCACC GACAACCGCC GCGACGGGCG TTTCGGCTCA
CGGCCGGAGC TGGTCCCGGC CGCGCCACCG CCGGTCGCCG CGCCCGCACC GACGCCGGCG
CGCACCCAGG CACCGGATCA GCCCCGCGCC CAGCCCCCTG TGCAGGCCGT CGCACCCGCG
GCGCCCATCC AGCAGACACC GCCGCCACGC GGCAACTTTC CTGGCCTGGA CCGCGGCCAG
CGCGAAGCCG GTGGCGGGCG CCCCGCCGCG CCACCCGCAC CGATGGTGCA AGCCGCCCCG
GTGATGCCGG CCGCGCCACC GCCGGCGATG GTCGCCGCAC CACCGCCGGC TGTGGTCGTC
ACCCCGCCGC CGCGCCCCGA ACAGCGCATC GCCGTGCCAC GCGCCGAACC GCCCCGACCG
CCCGAAGTGC GCCAGGAGCA ACGTCGCGAC AATCCGCCGC AGCGCACGCA AGGGCGCCCG
GACGGTCAGC CCGAACCGCG CCAGGACGGT CGCCGCGAGC GTTGGCCACC GGGCCGCGAG
CAGTGA
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| Protein sequence | MFIKMCRPLW AMACLLLAAL LAGPGLARAA DDPPGRVGRI AWIDGDARLA RGDGGDTLDH
ARDSLRNWPV TSGDELSVGN NSRAEIGIGS TRLRLGENSQ LLLRRVDDER IELELLGGSL
AVLLGSDEVA RELSIETDAA RLLPLGAGLY RIDVPDAERG HTHLHAATAW RNGLRIEQPA
GSYLLQPGQR AEIYVDGGFR LDTPEADGFA RWAMNDDDLR LQQASRDAPV PDEMTGAHEL
DRHGDWTRSA DYGWVWYPRT VVVGWAPYRH GRWSWVSPWG WTWIDDAPWG FAPFHYGRWV
WWRDRWGWVP GDHTPRPVYA PALVVWNGQP GLSWSISIGT GVAWYPLAPR EVYVPAYAFS
PRHVRLLNQP HVHDGPLLRR VMERPDEVLR HTPYRYRQFS GAVSTGIGRD GRDGRFFRPA
PWRGAVELPP RMRAPQAPPV VTRIQPPQPP RERWERDRRD RNERGDRIDR GDRFDRPDRQ
PAPPQPDMRH HGDIDRNRPP GANAPPAPPP NPSQRFVPGQ VPIQPGQAAR PQPGLAQPVA
PQPGASFPGL RPRDGARPDG RPDADPDGRT DNRRDGRFGS RPELVPAAPP PVAAPAPTPA
RTQAPDQPRA QPPVQAVAPA APIQQTPPPR GNFPGLDRGQ REAGGGRPAA PPAPMVQAAP
VMPAAPPPAM VAAPPPAVVV TPPPRPEQRI AVPRAEPPRP PEVRQEQRRD NPPQRTQGRP
DGQPEPRQDG RRERWPPGRE Q
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