Gene Lcho_0469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0469 
Symbol 
ID6160928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp508646 
End bp509095 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content69% 
IMG OID641663218 
Producthypothetical protein 
Protein accessionYP_001789509 
Protein GI171057160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC CGCTGCCGCG CCACGCCGAT GTCCGGGTCG ACCGGCTGGT GCGCTATTTC 
GAGTCGCTGG CACCGGCCGA TCTGGACCGG CTCGACCAGA TCTACAGCGC CGACGCCGCG
TTCAAGGATC CCTTCAACGA GGTGCGCGGC ATCGCGGCGA TCCGGCCGAT CTTCGAGCAC
ATGTTCCGCA CGCTGCGCAC ACCGCGCTTC GTGGTGCGCG AGGCGATCGG GCAGGGCGAT
CAATGCTGTC TGACGTGGGA TTTCCTGTTC GTCGCGCCCG GCATGGGCGA GCGCGAACAG
TGCATCCGCG GCGCCACCCA CGTGCGCTTC GATGCCGCCG GCCGGGTCTG CCTGCACCGC
GATTATTGGG ACGCGGCCGA GGAGCTCTAC GAGAAGCTGC CGCTGCTGGG CGCGCTGATG
CGCTGGCTCA AGCGCCGCGC CGCAACCTGA
 
Protein sequence
MTPPLPRHAD VRVDRLVRYF ESLAPADLDR LDQIYSADAA FKDPFNEVRG IAAIRPIFEH 
MFRTLRTPRF VVREAIGQGD QCCLTWDFLF VAPGMGEREQ CIRGATHVRF DAAGRVCLHR
DYWDAAEELY EKLPLLGALM RWLKRRAAT