Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0458 |
Symbol | |
ID | 6163912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 498553 |
End bp | 499125 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641663207 |
Product | YceI family protein |
Protein accession | YP_001789498 |
Protein GI | 171057149 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCT CACTGACCTT CACCGCCGCC GTGGCCGCGT TCACCTTCCT GGCCAGCGGC GCCGCCTGCG CGCAGCAGAA AGTCGATGCC GCCAAGAGCG AGATCGGCTT CGTCAGCAAG CAGATGGGCG TGCCGGTCGA AGGCAAGTTC CGCAAGTTCG ACGCCCAGCT GGCGTTCGAT CCGAAGAAGC CCGAAGGCGG CAAGGTGAGC TTCAGCATCG ACCTCGGCAG CGCCACCCTG GGCGTGCCCG AATCCGATGC CGAGCTGCCC AAGGCCACCT GGTTCAACGT GCCGAAGTTC CCGCAGGCGA CCTTTCAGTC GAGCGCGATC AAGGCCTTGG GCGGCGGCAA ATATGAAGTG GCCGGCAAGC TGAGCATCAA GGGCGCCGTC AAGGACGTGA CCGTGCCGGT GGCGCTGGCC CAGGCCGGCG GCGCGACCAC CGCGACCGGC AGCTTCGCGA TCAAGCGCCT CGACTTCAAG ATCGGCGACG GCGACTGGGC CGACACCTCG ATGGTCGCCA ACGACGTCCA GGTGAAGTTC AAGCTGCAGA TCAGCGGCAT GGCCGCACTC TGA
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Protein sequence | MNTSLTFTAA VAAFTFLASG AACAQQKVDA AKSEIGFVSK QMGVPVEGKF RKFDAQLAFD PKKPEGGKVS FSIDLGSATL GVPESDAELP KATWFNVPKF PQATFQSSAI KALGGGKYEV AGKLSIKGAV KDVTVPVALA QAGGATTATG SFAIKRLDFK IGDGDWADTS MVANDVQVKF KLQISGMAAL
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