| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0454 |
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| Symbol | |
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| ID | 6163908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 495791 |
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| End bp | 496810 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663203 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001789494 |
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| Protein GI | 171057145 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGA CGATCCGCGA AGTCGCGCTG GCCGCCGGCG TGTCGATCGG CACCGTCTCG
CGGGCGCTGA AGAACCAGCG CGGCCTGTCC GACGAAACCC GCCGCCACGT GCGTGCGGTG
GCCCGCCAGC TCGGCTACGA CAGCGACCGG CTGCGCTCGG GCAAGGCGCA GCGGCTGGTG
TTCCTGGTGC ACCGCCATCA CAGCAGCTTC GCGCTCAACC CGTTCTTCTC GCTGGTGATG
CACGGCGTCG AAGAAGCCTG CCGCGAGTTC GGCATCGCGC CCACGCTGCT GGCCGCCGGG
CCGGCCGATC CGGTGCGCGA CCTGCTGCGC CTGCACGAAC CCGACGCGCT GCTCGCCGCC
GGCTATTTCG AGGCCGAGCT GCTGACGCTG CTCAAGGGGC TCGAGCTGCC GATGGCGCTG
GTCGACTTCT GGATGCCCGG CTGCGCCTCG GTCAACCCCG ACAACCGGAT GGGCGGCTAC
CTCGCCACCC GCCACCTGCT CGACCTCGGC CGGCGCCGCA TCGCCTACCT GGCCGGCTCG
CTGGCGCACT TCAGCAGCCG CGAGCGCGAG CTGGGCTATC GCCGCGCGCT GTTCGAGGCC
GGCGTGCTGG CCGACCCCGA CCTCGAAGTG ATCGCGCCGC CCGGCCTCGA TGTCGCCAGC
GGCGCCGAGG CCGCCATGCG CGTGCTGCTG CGCCTGCACC CGCGGCCCGA CGCCCTGTTC
GCCTACAACG ACACCGCCGC GCTGGCCGCG CTCGAGGTCT GCCAGGAAGC CGGCCTGCGC
GTGCCGCAGG ACATCGCCAT CGTCGGCTTC GACGACATCC CCGCCGCCGG CTACGCCCCG
ACGCCGCTGA CCACGTTGCG GGTCGACAAG GCGGCGCTCG GGCGCACCGG CGTCGAGCTG
ATCATGCGCG GCGCCGAGAT GCCGCAGGAG ACCACCCTGC CGGTCACGCT GATCGTGCGC
GCCAGCAGCC GGATCGACAG CAGCAGCGCC GTCGAGGCCG CGACCGCCGC CATCGACTGA
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| Protein sequence | MRVTIREVAL AAGVSIGTVS RALKNQRGLS DETRRHVRAV ARQLGYDSDR LRSGKAQRLV
FLVHRHHSSF ALNPFFSLVM HGVEEACREF GIAPTLLAAG PADPVRDLLR LHEPDALLAA
GYFEAELLTL LKGLELPMAL VDFWMPGCAS VNPDNRMGGY LATRHLLDLG RRRIAYLAGS
LAHFSSRERE LGYRRALFEA GVLADPDLEV IAPPGLDVAS GAEAAMRVLL RLHPRPDALF
AYNDTAALAA LEVCQEAGLR VPQDIAIVGF DDIPAAGYAP TPLTTLRVDK AALGRTGVEL
IMRGAEMPQE TTLPVTLIVR ASSRIDSSSA VEAATAAID
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