Gene Lcho_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0430 
Symbol 
ID6163872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp471680 
End bp471919 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content66% 
IMG OID641663179 
Productzinc finger CDGSH-type domain-containing protein 
Protein accessionYP_001789470 
Protein GI171057121 
COG category[S] Function unknown 
COG ID[COG3369] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CCCACATTGC CCAGAAAGCC CCATTCCCCG TGGCCGTCGA GGCCGGCAAG 
AGCTACTGGT GGTGCGCCTG CGGGCAGAGC AGGAACCAGC CGTTCTGCGA CGGCTCGCAC
AAGGGCAGCG CGTTCTCGCC GATGGAATAC AAGGCCGCCG AGGCCGGCAC GGTGTATTTC
TGCGGCTGCA AGCACAGCGC AAAGGCGCCC TTGTGCGACG GCACGCACAA GTCGCTCTGA
 
Protein sequence
MSQPHIAQKA PFPVAVEAGK SYWWCACGQS RNQPFCDGSH KGSAFSPMEY KAAEAGTVYF 
CGCKHSAKAP LCDGTHKSL