Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0373 |
Symbol | |
ID | 6163779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 407485 |
End bp | 408567 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663122 |
Product | Mg2 transporter protein CorA family protein |
Protein accession | YP_001789413 |
Protein GI | 171057064 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0598] Mg2+ and Co2+ transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.000133876 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGCGT TCCTGATCGA CGACAGCGGC TGCGTCGAAC TCGACGCCTG GCCCGACCAG CTGCCGCCGG GCGGCCACCT CTGGCTGGCC TGCCCGCGGC GCGAGTTCGA GGTCCAGGTG GCGCAGGTGC AGGCGGCGCT GCACCGCTGG ACGGGCGGCA GCCTGGTCGA CCTGCACATC TCCGACCTGC TCAACCAGCA CCTGCCCTCG CACTACGACT ACACCTCGTG GTACGACCTG CTGGTGTTCC GTCGCCTGGC CGCAGCCCCC GGCAGCAATG GCCCGCCCAC GCCCGAAAGC ACCGCCCAGG CGATGCAGGC GCTGCAGGCG ATCGACACCC ATCCGGTCGG CTTTGCGGTG TTCGACCGCG TGCTGCTGAC CGTGCACCCG GCCGACTGCC CGGTGCGCGA GTTCTTCGCC CAGCGCCTGA CCCAGATCCA GCCCGTCTCG GGTGGCACGA GCCGCCTGCC CGCCAGCCCG GCCGACCTGA TGCTGCGCAT CGTCAACCAC ATGGTGGACG GATACCTCGA GCTGCGCCGG CTGCTCAGCC GCCAGCTCGA CACGCTGCAG AACAAGCTGC TCGGCCCGCG CAGCCGCCAC CGGAACTGGC AGGCGCTGCT CGAATCGCGC AACAGCCTGC ATCAGCTCGA GGACATCTGC GAAGACCAGC GCAGCGCGAT GCAGGAGTGG ATCGACGCGC TCGACGAGTG GCCCCCGGCC AAGGACAGCC AGGCCGCGCG CGAGCGCGAA CTGCTGCGGG TGCGCTCACG CGACGTGCTC GAACACATCG AACGGGTGCT GAGCCACGTG CGGCGGCTCG AATCGTCGTC CGAAAGCGCG ATGCAGATGC ACTTCTCGGC GCTCGGCCAG CGCACCAACG ACATCATGCG CACGCTCACC GTGCTGACCG CGATCTTCCT GCCGCTGAAC CTGATCACCG GCATCTTCGG CATGAACTTC GATTTCCTGC CGCTGATCCA CAGCAACACC GGCTTCTGGA TCGCGATGGC GCTGATGGCC AGCGTGGCAG TCGGGCTGGG CGCCTTCTTC TGGCGCAAGC GCTACCTCGG CACGCGCCAC TGA
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Protein sequence | MRAFLIDDSG CVELDAWPDQ LPPGGHLWLA CPRREFEVQV AQVQAALHRW TGGSLVDLHI SDLLNQHLPS HYDYTSWYDL LVFRRLAAAP GSNGPPTPES TAQAMQALQA IDTHPVGFAV FDRVLLTVHP ADCPVREFFA QRLTQIQPVS GGTSRLPASP ADLMLRIVNH MVDGYLELRR LLSRQLDTLQ NKLLGPRSRH RNWQALLESR NSLHQLEDIC EDQRSAMQEW IDALDEWPPA KDSQAARERE LLRVRSRDVL EHIERVLSHV RRLESSSESA MQMHFSALGQ RTNDIMRTLT VLTAIFLPLN LITGIFGMNF DFLPLIHSNT GFWIAMALMA SVAVGLGAFF WRKRYLGTRH
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