| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0325 |
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| Symbol | |
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| ID | 6161449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 351562 |
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| End bp | 352647 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663074 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001789365 |
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| Protein GI | 171057016 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGA TCTTCTCCGT CACCGTCCCG TTTTTTGCGC TGATCCTGGC CGGTTACCTG
GCCGCGCGGC GGCGCATCCT GCCGCTCGAC GCGGTGCCGG GGCTGAACGC CTTCGTCCTC
TATTTCGCGC TGCCGTGCCT GCTGTTCCGC TTCGGCTCGA CGCTGCCGGT GCGCGAGCTG
TTCGATCCGG TCGTGCTGGG CGTCTACCTG CTGTGTGCGC TGGTGATCGT CGGCTTCACG
ATCGCGGTCA CGCTCAAGTC GCCGGTCGGC CTGAAGGATG CCGCCTTCGG CGCGCTCGTC
GCGGCCTTCC CGAACTCCGG CTTCATGGGC GTGCCGCTGC TGGTGGCGCT GGTCGGCCAG
GCCGCCGCGG GGCCGGTCAT CACGGCGGTG ATGGCCGACA TGATCATCAC CAGCTCGCTG
TGCATCGCGA TCGCGCAGGC CCACCAGGAG CGCCACACCC AGCCGCCGAG CCAGATCGAC
GACGTCACCA GCACCCTGCC GCCGGGCGTC GAACTCGTGC GCACGCCCGG CGCCACGGCC
GAAACCCGCG CGGCGGTGCT GCGCTCGCTG CGCGCGGCGT TCGGCAACCC GCTGCCGTGG
TCGATCGGGC TGGGCGCGCT GGCCTCGGCC ACCGGCCTGA GCCTGCCCGG CCCGCTCGCC
AGCGTGGTCG GCATGCTGGC CAACGCGGCC AGCCCGGTGG CGCTGTTCAC GATCGGCGCG
GTGCTCTGGC GCGCCGGCCA GCCGCATGCG CCGGTGGCCG TCAACGGCAT GGCGGTGGTG
CGCCCGCCGC TGGCGACGCC GCTGGCGCGC TACCTGCCGG TGGCGCTGAT CAAGCTGCTG
CTGCACCCGC TGCTGGTGCT GCTGGTCGGC CTGGCGGCGC GCGGGCTGGG CGCGCCGCTG
TCGTCGTTCC AGCTGATGGT GCTGGTGCTG ACCGCGGCGC TGCCCAGTGC CAGCAACGTC
TCGCTGCTAG CCGAACGCTA CGGCGCCGAC AACGGCCGCA TCGCCCGCAT CATCCTGGCT
TCGACCGTGC TCGCCTTCGG CAGCTTCTCG GCGCTGGCGT GGTTGTTCGG GGTTCAGCCC
GTCTGA
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| Protein sequence | MQAIFSVTVP FFALILAGYL AARRRILPLD AVPGLNAFVL YFALPCLLFR FGSTLPVREL
FDPVVLGVYL LCALVIVGFT IAVTLKSPVG LKDAAFGALV AAFPNSGFMG VPLLVALVGQ
AAAGPVITAV MADMIITSSL CIAIAQAHQE RHTQPPSQID DVTSTLPPGV ELVRTPGATA
ETRAAVLRSL RAAFGNPLPW SIGLGALASA TGLSLPGPLA SVVGMLANAA SPVALFTIGA
VLWRAGQPHA PVAVNGMAVV RPPLATPLAR YLPVALIKLL LHPLLVLLVG LAARGLGAPL
SSFQLMVLVL TAALPSASNV SLLAERYGAD NGRIARIILA STVLAFGSFS ALAWLFGVQP
V
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