Gene Lcho_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0154 
Symbol 
ID6163210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp159054 
End bp160397 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content63% 
IMG OID641662898 
Productflavin-containing monooxygenase FMO 
Protein accessionYP_001789194 
Protein GI171056845 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GTGTCGCCGT CATCGGTGCG GGTCCCTCTG GCCTGGCCCA GTTGCGGGCG 
TTCCAGTCGG CAGCGGCCAA GGGTGCCGAG ATCCCCGAAG TGGTCTGCTT CGAGAAGCAG
GGCAACTGGG GCGGGTTGTG GAACTACACC TGGCGCACCG GCCTCGACCA GTACGGCGAA
CAGGTGCATT GCTCGATGTA CCGCTACCTG TGGTCCAACG GCCCGAAAGA GGGGCTGGAG
TTCGCGGACT ACAGCTTCGA CGAACACTTC GGTCGCCCGA TCGCCTCGTA CCCGCCGCGG
GCCGTGCTGT TCGACTACAT CGAGGGCCGC GTCAAGAAGG CCGGCGTGCG CGACTGGATC
CGCTTCAACA CCGCCGTGCG TCAGGTCACC TTCGACGCCG AGAGTGCGCA ATTCACCGTG
ACCGTGCACG ACCTGGTCAA TGACCGCACC TATTCGGAGC TTTTCGATTA CGTGGTAGTG
GCCTCGGGGC ATTTCTCGAC CCCCAATGTG CCGTCCTTCG CGGGCTTCGA GGGCTTCAAT
GGCCGGGTGC TGCATGCGCA CGATTTCCGC GATGCGCGCG AATTCGCCGG CAAGGACGTG
CTGCTGATCG GCACCAGCTA TTCGGCCGAG GACATCGGCT CGCAGTGCTG GAAATACGGC
GCCAGGTCGA TCACCATCAG CCATCGCACC AAGCCGATGG GTTTCAACTG GCCCGACAAC
TGGTCCGAAG TGCCGCTGCT GGAGCGGGTC GATGGCCACA CGGCACTGTT TCGCGACGGC
AGCAGCAAGC ACATCGACGC GATCATCCTC TGCACGGGCT ATGTGCACCA CTTTCCCTTC
CTGGGCGACG ACCTGCGCCT GAAGACCAGC AACCGCCTCT GGCCGCTCGG TCTCTACAAC
GGCGTGGTGT GGGAGAAGAA CCCGCAGCTC TTCTACGTCG GCATGCAGGA CCAGTGGTAC
ACCTTCAACA TGTTCGACGC GCAGGCCTGG TATGCCCGCG ACGTGATGCT GGGCCGCCTG
CCATTGCCTG ACCTTGCGAC GATGCAGGCC GAAAGCGCCG ATTGGCGCAA GCGAGAAGAA
GCACTGGCCG ACGATTACGC CGCCATCCGC TACCAGAGCG AATACACCGC CGGCCTGGCC
GCATTGACCG ACTACCCGCC ACTCAACATC GAAGGCATGA ACGAGGCCTT CTTCCAATGG
AAGAAGCACA AGAAGGAAGA CATCATGGGC TTTCGCAACA ACAGCTATCG CTCGGCCATC
ACCGGCACCA TTTCGCCACC GCACCACACG CCGTGGAAAG ACGCGCTGGA CGATTCGCTC
GAGAGCTATC TCGGCAAGCC CTGA
 
Protein sequence
MNKRVAVIGA GPSGLAQLRA FQSAAAKGAE IPEVVCFEKQ GNWGGLWNYT WRTGLDQYGE 
QVHCSMYRYL WSNGPKEGLE FADYSFDEHF GRPIASYPPR AVLFDYIEGR VKKAGVRDWI
RFNTAVRQVT FDAESAQFTV TVHDLVNDRT YSELFDYVVV ASGHFSTPNV PSFAGFEGFN
GRVLHAHDFR DAREFAGKDV LLIGTSYSAE DIGSQCWKYG ARSITISHRT KPMGFNWPDN
WSEVPLLERV DGHTALFRDG SSKHIDAIIL CTGYVHHFPF LGDDLRLKTS NRLWPLGLYN
GVVWEKNPQL FYVGMQDQWY TFNMFDAQAW YARDVMLGRL PLPDLATMQA ESADWRKREE
ALADDYAAIR YQSEYTAGLA ALTDYPPLNI EGMNEAFFQW KKHKKEDIMG FRNNSYRSAI
TGTISPPHHT PWKDALDDSL ESYLGKP