| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0135 |
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| Symbol | |
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| ID | 6161263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 138751 |
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| End bp | 139803 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641662879 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001789175 |
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| Protein GI | 171056826 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.370225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATC TCGAACTCAA GGGCATCGAA AAATTCTTCG GTGACCTGCG CGCCATCAAG
GGCATCGACC TCGCCATCAA CCCGGGCGAA TTCATCGTGT TCGTCGGCCC GTCGGGCTGC
GGCAAGTCGA CCTTGCTGCG CCTGATCGCC GGGCTCGAAC ACATCGACGG CGGCCGGCTG
ATGCTCGACG GCCGCGACAT CACCGACCTG CCGTCGTCCA AGCGCGACCT GGCGATGGTG
TTCCAGAGCT ACGCGCTCTA TCCGCACATG AGCGTGTTCG AGAACATGAG CTTCGCGCTC
AAGCTCGCCG GAGTCGATCC GTCCGTCATC AAGGACAAGG TCGAGCGCGC CGCCAAGATC
CTGAACCTGA CGCAGTACCT CGACCGCACG CCCAAGGCGC TGTCGGGCGG CCAGCGCCAG
CGGGTGGCGA TCGGCCGGGC CATCGTGCGG GCGCCGAAGG TCTTCCTGTT CGACGAACCG
CTGTCCAACC TGGATGCGGC GCTGCGCGGC CAGACCCGCG TGGAGATCGC CAAGCTGCAC
CGCGACCTCG GCGCCACCAC CATCTACGTG ACGCACGACC AGGTCGAGGC CATGACCTTG
GCCGACCGCG TGGTGGTGCT GCGCGACGGC GTGATCGAGC AGGTCGGCAC GCCGCTGGAG
CTCTACGACA AGCCGGCCAA CCAGTTCGTG GCGCAGTTCA TCGGCACGCC GCAGATGAAC
GTGGTGGCGG CCGACAAGCT GCCGCAGCTC GAGGCGGTCT ACGGCCTGCC GGTGCCGGCC
GGCGGCTTCG TCGGTCTGCG GCCCGAATAC GTGACGCTGA AGACGGCCGG CTCGGGCGTG
GTGCAGGGCA CCGTCGAGCT GGTCGAGGCG CTCGGCGCCG AGACGCTGAT CTACGTCGCC
ACCGACCGCG GCGCGCAGCT CGTGTCGCGC CAGAGCACGC GCACCAACCT GCGTGCCGGC
GACTCGGTGG GCGTGGACAT CGACGCCGAT GCCGCCCATC TGTTCGACGC ACAGGGCCGC
ATCTCCCGCC CGGCCTTGGC CGCCGCGCAT TGA
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| Protein sequence | MAYLELKGIE KFFGDLRAIK GIDLAINPGE FIVFVGPSGC GKSTLLRLIA GLEHIDGGRL
MLDGRDITDL PSSKRDLAMV FQSYALYPHM SVFENMSFAL KLAGVDPSVI KDKVERAAKI
LNLTQYLDRT PKALSGGQRQ RVAIGRAIVR APKVFLFDEP LSNLDAALRG QTRVEIAKLH
RDLGATTIYV THDQVEAMTL ADRVVVLRDG VIEQVGTPLE LYDKPANQFV AQFIGTPQMN
VVAADKLPQL EAVYGLPVPA GGFVGLRPEY VTLKTAGSGV VQGTVELVEA LGAETLIYVA
TDRGAQLVSR QSTRTNLRAG DSVGVDIDAD AAHLFDAQGR ISRPALAAAH
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