| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0019 |
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| Symbol | |
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| ID | 6159937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 23470 |
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| End bp | 24855 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641662764 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001789060 |
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| Protein GI | 171056711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0435379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTGG CCTCGCTGCG CACGCTGTGG CAGCGTGCCG TCCCGGTGAT GCGCGAGGCC
CTGCTGGCGC GCAACGCCGA GGGCGAGCGG CCGTTCTGGA TGCTCGGCGA AGTGCCGGTG
CTGACGCTGG TCGTGCTCGT CGGTGGCCTG CTCGTCAGCC CGCAGGATCC GCTGTTCACC
CACGCCAGCG TGCCGTGGAG CTGGGTCGCG CCGGTGCTGC TGGCGCTGCG TTACGGCGTG
CTCAGCGGCC TGGCGTCGAT GGCGCTGCTG CTGGCGGCGT GGGCGCTGCT GATGCCCGCG
GCCGAGCCGC TGCCGGCGCA GGTCTTCATC GGCGGGCTGC TGCTGACGAT GGTCTGCGGC
GAGTTCAGCG GCAGCTGGCG CGGCCGGGTC GACCGGCTGG CCGAGGCCAA CAGCTACCTC
GAGGACCGCA TCGAGCGCGT CACCGGCCGG CTGTTCACGG TGCAGCGATC GCACGACCTG
CTGCAGCAGG AGCTGCTGCA GCGCCCGACC ACCTTGCGCC ACTCGCTCGA CGGCCTGGAG
CGGCGCGCGC TGGTGGCCGA GCAGTCGGTG GCGACGGCAG CGCAGGCCTT TCTCGACCAC
CTGGCGGCGA GCTGCCAGCT CGAGGATGCG CAGGTCATCG CCTACGACGA GCAGGCCGGC
CGCCCCGGCG CCGTGCTGGC GCAGCTGGGC GAGGCCACCG CGGTCGAGTT CGACGACCCG
CTGGTGCAGT ACGCGCTCAG CCGCGAGGGG CTCGCGCACG TGCAGGTCGG CCTGCCCGAC
GGGCCGCTGT CGACCCGCTA CCTGGTGGTC GCGCCGCTGC GCATCGGCCG CCAGCAGCTG
CCGGCGCTGC TGGTGGTGGC GCGCATGCCC TTCCTGGCGC TGCACGACGA GACGCTGCAG
ATGATCGCGG TGCTGTGCTC GGCGTTCTCG TCGGCGGCGC AGGTCAGCGA GGCGGTGGCG
GCGGTGCTGG CGCAGGTCGG CCACTGCCCG CTGCGGCTGG CCGAGGAGCT CGGCCGGCTC
GACCGCATCG CCCGCGAGCA TGCGATCGTC AGCCAGCTGG TGCTGCTGCG CTTCGACGAC
CCGGCACGCA GCGAGGAGCA GGTCAACATG GCGCAGCGCC GCGCCCGCGC GCCCGACGTC
AACTGGGCCT TTGCCGACGA GGCCGGCCGC CACCGGCTGC TGACGCTGAT GCCGCTGGCG
AGCGCGGCGG CGGTCGAGGG CTACCTGGCC CGCTTCACCG AGATGGTGGT CGGGCGCTAC
CGCGCCGAGG TCGCCGCGCC CAGCCTGGCC GGCCTGAACA TCGGCGTGCG GGTGCTCACG
CTCGGCGGCG AGCGCCCGCT CGGCGAGGCG CTGCGGCTGC TGATCGCCGA CGAGGAGACG
ACGTGA
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| Protein sequence | MTVASLRTLW QRAVPVMREA LLARNAEGER PFWMLGEVPV LTLVVLVGGL LVSPQDPLFT
HASVPWSWVA PVLLALRYGV LSGLASMALL LAAWALLMPA AEPLPAQVFI GGLLLTMVCG
EFSGSWRGRV DRLAEANSYL EDRIERVTGR LFTVQRSHDL LQQELLQRPT TLRHSLDGLE
RRALVAEQSV ATAAQAFLDH LAASCQLEDA QVIAYDEQAG RPGAVLAQLG EATAVEFDDP
LVQYALSREG LAHVQVGLPD GPLSTRYLVV APLRIGRQQL PALLVVARMP FLALHDETLQ
MIAVLCSAFS SAAQVSEAVA AVLAQVGHCP LRLAEELGRL DRIAREHAIV SQLVLLRFDD
PARSEEQVNM AQRRARAPDV NWAFADEAGR HRLLTLMPLA SAAAVEGYLA RFTEMVVGRY
RAEVAAPSLA GLNIGVRVLT LGGERPLGEA LRLLIADEET T
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