Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1829 |
Symbol | |
ID | 4438943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1815203 |
End bp | 1816780 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 639673645 |
Product | ABC-type multidrug transport system, ATPase and permease component |
Protein accession | YP_819522 |
Protein GI | 116630369 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000147985 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.205804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA TGCTGTTTAA GTATTCAAAT AAATTTAGAT TCGTATTGAT GATTATCTTC GGCTTAATTG CTAGTTTTCA AAATATTATT ATGGCCAATG TTGTGCAAAC ACTAACTAAT ATTGCTACTA ATAAAAATTG GGATAAAATT GCGCAATTTT TGACTATTAT CATTGCAGCA TTAGTTGTTA CCTTAATTGC AAGTCTAGTA TTTAACAGAT TGAAAACTAG TGCAATTAAG GAAACTAACA CTTATTTAAG AACACATATT TTGGGTGGAA TGCTAGAAGA GTCAAAAGAC GAAAATAGTG ATAGTTTAGG ATTTTTAACT AATGATTTTA AACTACTTGA AACTAATCGT TTTAATGCTC AAATTGAAAT TATTATGCAG ATTTTTTCAT TAGTATTAGC ACTAGGCTAT GCTTTAGCAG TTAATTGGCT ACTTACATTA CTATTCCTAG TTGGATCTTT TATTCCAATG ATTGTTTCTA ATGTTTTTCA AAAGCCGATT CAAGAATCTT CTGAAAAGTG GACTAGTGCT AATAGTAAGT ACGTTAATCA GACTAAAAAT TTCTTAGCGG GTGTTGAAAC GCTACATTTA TATGATGGTC AAAATCAGGC GGGTGCTAAA AATAAACAAA CAATTTCTAA GCTAGAACAG GCATTGAGTA ATATGAATCT CTTAAACCTT GATACGAACT CATGGATTAA TTTTGTTGGG AATATTGTTA CATTTTTGAT GCCATTTCTA TTTGGAATTT ATTTAGTTGT AAAAGGACAA ACAAGTTTAG GAGCTTTATT TGCAATTGTG CAATTAGCCA ATTCATTTAT AAATCCAATT TTATTTATCT TAGATGATAG AAGTAAACTG TCTACTACTA AGAAGATTGT TGAGAAGGTT AATGACTTTT TAGATAAAGA AACAGATCAA GAAAATAGTA AAGCTGTAAG TTTACAGGAT TTACAAGTAG AAGATTTGAT CTTAAAGAGA GATGGTAAGC AATTAGCTAC TGGGATTGAC TTAAACATCA AGTCAGGTAA GAAAATTGCT GTCATTGGAC CATCTGGAGC AGGAAAGTCG ACTTTATTGC AGTTCTTACT ATATGGAAAA TATGGAAAAG CAGAGGCGAT TAGATTAAAT GATAAAAGAG TAAAAGCTGG TACATTTCCA GACTTATTCT CATATGCAAG CCAAGCACCG GTTATTTTTG CGGATAGTTT ATTGTTTAAT TTAACCTTAG GAAAAAACAT TTCCCGGGAA AAGGTAGAGG AAGTTTGCGA TAAATTAGAC TTAAATGGAT TAATTAAAGA AAAAGGTTTT GATTATCAAT TGGGGGAAGC AGCGGATAAA TTATCTGGTG GACAATTAGC ACGAATTGAA TTAGCTAGAG CAATTTTAAT GGAAAGACCA GTCCTATTAC TCGATGAAAT TAACGCTTCT CTTGATAAAA AAACTTCTGA TATAATTCAT CAATATTTGC TAGCTGCAAA TTTAACTTTC ATTGAAGTAA TTCACCACTA TGAAGAAGAT GAGTTAAAGC AATATGACGA AATACTTGAT TTAAAGGACT ATATTTAG
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Protein sequence | MKKMLFKYSN KFRFVLMIIF GLIASFQNII MANVVQTLTN IATNKNWDKI AQFLTIIIAA LVVTLIASLV FNRLKTSAIK ETNTYLRTHI LGGMLEESKD ENSDSLGFLT NDFKLLETNR FNAQIEIIMQ IFSLVLALGY ALAVNWLLTL LFLVGSFIPM IVSNVFQKPI QESSEKWTSA NSKYVNQTKN FLAGVETLHL YDGQNQAGAK NKQTISKLEQ ALSNMNLLNL DTNSWINFVG NIVTFLMPFL FGIYLVVKGQ TSLGALFAIV QLANSFINPI LFILDDRSKL STTKKIVEKV NDFLDKETDQ ENSKAVSLQD LQVEDLILKR DGKQLATGID LNIKSGKKIA VIGPSGAGKS TLLQFLLYGK YGKAEAIRLN DKRVKAGTFP DLFSYASQAP VIFADSLLFN LTLGKNISRE KVEEVCDKLD LNGLIKEKGF DYQLGEAADK LSGGQLARIE LARAILMERP VLLLDEINAS LDKKTSDIIH QYLLAANLTF IEVIHHYEED ELKQYDEILD LKDYI
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