Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1659 |
Symbol | |
ID | 4439134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1622333 |
End bp | 1623016 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673481 |
Product | flavoprotein |
Protein accession | YP_815389 |
Protein GI | 116630217 |
COG category | [S] Function unknown |
COG ID | [COG2461] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000241633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGAAC CAAAATGGCT AAAAGATTTA AAAGAAGAAG ATTATATTAA AGAGGATTTT GATGCAACTG GTAAATCACG CTACACTGTT GAAGGTATAG ACAAAAATGA TCCAGATTGG TTAGATAAGG CGGCTAAGAA AGTAAATGCA GCTGAAGGTG ACGACTACGT AAAGCTTGAT GCTGGACTTC TTACAGTTAA CCAAATTAAC TGGATGCTTC GTCGTGCATT TGGTGAATTA ACTTATGTTG ATGATAATAA CCAATTTTTA TGGTATAACA AGCCAACTGA TCCAAGTAAG AAGATGCTTG CTGGTCGTAC GCCAGATCAA GTTGGTGATA CTATGGGAGC AGTTCACCCT CATATTCGTA ATGTTATTCC TGAAGCTAAG AAAGTTATTT ATGCTTTAAG AAATAAGGTA GATGGACACG ATGAAGTTAA GATGCCAGTG CCAAACGGTA ATCGTCATAA GTTAATTTTG CATGATTATA AGCGAATTGA AGACGAGGAT GGTAATTACA TGGGAACTTA TGAATGGGTA CAAGATATTT ATCCATTTGT AAAATATTTC TGTGAAACTA CTGGTCAGAA GTTGGTAGAT GACCCGATGC AACTACTGGT GCAACTTATA AGAAAGATGA AGTTGATACT GGAACTGGTG CATCTAAGCA CGAAGAACAC GTAG
|
Protein sequence | MAEPKWLKDL KEEDYIKEDF DATGKSRYTV EGIDKNDPDW LDKAAKKVNA AEGDDYVKLD AGLLTVNQIN WMLRRAFGEL TYVDDNNQFL WYNKPTDPSK KMLAGRTPDQ VGDTMGAVHP HIRNVIPEAK KVIYALRNKV DGHDEVKMPV PNGNRHKLIL HDYKRIEDED GNYMGTYEWV QDIYPFVKYF CETTGQKLVD DPMQLLVQLI RKMKLILELV HLSTKNT
|
| |