Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_1621 |
Symbol | |
ID | 4439161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 1582064 |
End bp | 1583374 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639673447 |
Product | seryl-tRNA synthetase |
Protein accession | YP_815355 |
Protein GI | 116630183 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00511187 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0677576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACA TAAAGGTAAT TCGAGAGAAT TTAGACTGGT CAAAGAAGAA ATTAGCTACA CGTGGAATAA AGCCAGAAGA ATTAGACAAA TTAGTGGCTA TTGATAAAGA AAGACGTGAG GCTTTAACTA AGAGCGAGCA ATTAAAGCAA AAGCGTAATG AAGTATCCGA TCAAATTGCA CAAGCTAAGC GTAATAAAGA AGACGCCAGC GATGCTATTA AGACAATGCG TGAAGTCGGA AAAGAAATTA AGGATTTAGA TAAAGAAGTA GAAGACCTTA CTCAAAAACA AAAGTATATT TTACTTCGTT TACCTAACTT CCCAGCAGAT TCAGATCCTA TTGGACCAGA TGAAAGCTAT AACGAAGAGG TTCGTAAATG GAATGAACCA ACTAAGTTTG ATTTTGAACC AAAGCCTCAC TGGGAAATTG GTACTGAATT AAATATTTTA GACTGGGATA CTGCTGCTAA GGTTTCAGGC GCCCGTTTTG TTTACTATAA AGGTGCTGGT GCCTTACTTG AGCGTGCAGT TTCAAATTTC TTCTTAGATG AAAATACTAA AGATGGTTAT ACTGAAGTGA TCCCACCATA CTTGGTAAAT GATGCTTCTA TGCAAGGAAC TGGTCAATTC CCTAAATTCA CTGAAGATGT TTATACAATT GTTGATAATG ATGATCCTGA TAAGCCACGT GATTTAACTT TAATTCCAAC TGCAGAAGTT CCATTAGTTA ACTACTTCCG TGGCAAGATT TTAGATGCAA AGCAATTACC AATTAATGTT ACTGCATTCT CTCCAGCGTT TAGAAGTGAA GCGGGATCTG CAGGACGTGA CACTCGTGGA TTGATTAGAA TGCACGAATT TAGAAAAGTT GAAATGGTAA AAATTGTTGA TGAAGACAGT TCATGGGATG AATTGGAAAA ATTAACGCAT AATGCTGAAC ATTTACTTCA AAAGCTCGGC TTACCATATC ATGTTGTTGC CCTTTCAACT GGGGATGCAA GTTTTACTAG TGCTAAAACT TATGACCTTG AAGTATGGAT GCCAGCTCAA GATAAATATC GTGAAATTTC AAGCTGTTCA AACTGTACAG ATTTCCAAGC TCGTCGTAGC TTAATTCGTT ATCGTGATGA AAATGGTAAG CTTCATTTAG CTCATACTTT GAATGGATCA GGTCTAGCTG TAGGTAGAAC TGTAGCAGCT ATTTTAGAAA ATTACCAAAA TGAAGATGGA ACTGTAAACG TACCCGAAGC ATTACAACCA TACATGCATG GTATGAAAGT AATTACTAAA GAACCAAAAT TTGGTGAATA A
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Protein sequence | MLDIKVIREN LDWSKKKLAT RGIKPEELDK LVAIDKERRE ALTKSEQLKQ KRNEVSDQIA QAKRNKEDAS DAIKTMREVG KEIKDLDKEV EDLTQKQKYI LLRLPNFPAD SDPIGPDESY NEEVRKWNEP TKFDFEPKPH WEIGTELNIL DWDTAAKVSG ARFVYYKGAG ALLERAVSNF FLDENTKDGY TEVIPPYLVN DASMQGTGQF PKFTEDVYTI VDNDDPDKPR DLTLIPTAEV PLVNYFRGKI LDAKQLPINV TAFSPAFRSE AGSAGRDTRG LIRMHEFRKV EMVKIVDEDS SWDELEKLTH NAEHLLQKLG LPYHVVALST GDASFTSAKT YDLEVWMPAQ DKYREISSCS NCTDFQARRS LIRYRDENGK LHLAHTLNGS GLAVGRTVAA ILENYQNEDG TVNVPEALQP YMHGMKVITK EPKFGE
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