| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1182 |
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| Symbol | def |
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| ID | 4439610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 1183384 |
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| End bp | 1183938 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673019 |
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| Product | peptide deformylase |
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| Protein accession | YP_814989 |
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| Protein GI | 116629817 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0488263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.109178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATTTTAA TGCATGATAT TACGCGCGAT GGCAACCCCG TTTTAAGACA AGTTGCTAAG
CCATTAACTT TCCCATTAGC TGATGAATAC AAAGAATTAG CTGATGAAAT GATGCAATAT
TTAATTAATT CGCAAGATCC TAAAATTGCT GAAAAGCACC AATTAAGAGC TGGCGTTGGT
TTAGCTGCTC CACAAGTTGG CAAGAGCATT CAAATGGCTG CCCTTTTAGT TCCAAATGAT
AAAGGTGAAA TTATTTTTAA GGAAGTTTTT GTCAATCCAA AAATTATTTC TGAATCAGTA
AGAAAAGCTT GTCTTGCTGA AGGCGAAGGC TGCCTAAGTG TAGATAAAGA TATTGAAGGC
TATGTTCCTC GTCCTGATAA GTTAAAGATT CATTATTATA CAGTTGACGG TGAAGAAAAG
ACAATTCGCC TAAAAGATTA TCCAGCAATT GTTGCTTCTC ACGAAATTGA CCACTTAAAT
GGTCACTTAT TCTATGACCG TATCAATAAG CAAAATCCTT TTGATTTAGC CGAAGATACC
ATTGTTATTT CTTAA
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| Protein sequence | MILMHDITRD GNPVLRQVAK PLTFPLADEY KELADEMMQY LINSQDPKIA EKHQLRAGVG
LAAPQVGKSI QMAALLVPND KGEIIFKEVF VNPKIISESV RKACLAEGEG CLSVDKDIEG
YVPRPDKLKI HYYTVDGEEK TIRLKDYPAI VASHEIDHLN GHLFYDRINK QNPFDLAEDT
IVIS
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