| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1009 |
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| Symbol | |
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| ID | 4439805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1009336 |
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| End bp | 1010223 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639672852 |
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| Product | hypothetical protein |
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| Protein accession | YP_814823 |
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| Protein GI | 116629651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000831785 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGATAG CACTCATTAC AGATAGTACT AGTGATATAA GCCCAGAAGA AGCCAAGGCC
AACGATATTA CTGTAGTACC AATCCCAGTT ATCATTGGAG ATAAGCAATA TATGGATGGG
ATAGATATTA CTGCAGAAAA ACTTTTTGAG TTAGAGCGCG ATGGAGCACC TTTTCCGAAG
ACTTCGCAAC CTAGTCCAGG TACTATGCTT GAATTATGTC AAAAATTAAA AGATGAAGGC
TATGAAGCAA TTATTGCTAT TCCACTAACA TCAGGTATAT CAGGCTTCTA CAACAGCTTA
GTTAACTTAG CACATACTCA TCCTGAGTTT AACCTTTACC CTTATGATCC AGCAATGACA
GTTCGTTCAA TGGGAAACTT AGTACTTGCT GCTGCCAAAA TGATTAAAAA TGGTTGGGAA
CCTAAAGAGA TTTTAGCTAA ACTTGATGAA ATCAGAGATA CAATTGATGT TTTATTTGTT
GTAGATGACT TAAATAATTT AGTTCGTGGT GGTAGATTAA GTAATGCGAG CGCCTTTATT
GGTACTATGC TTCAAATTAA ACCACTATTA ACGTTTAAAA AAGATGATTA TCAAATTGTA
AGCTTTGATA AAGTACGTTC GATGAAACGT GCAGTAAAGA AAGCAGAAAA CATCACTATT
GAAAGAATTA ATAATTCACC AATTAAAGAT AATATAGCGT TAACTGTTTA TAATTCAAAT
TATTTAGAGC AAGCTACTAA GGTTAAAGAT GATTTTCAAG CCGCTTTCCC TAATATGACC
ATCAAAATGT TCAATTTTAG TTCTGTGATT GCCACATATT TAGGAGAGAA ATCTCTTGGT
ATTACTTGGA TGGCAGACAT TGATAAAATG GACTTTAGTA AAAAATAA
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| Protein sequence | MKIALITDST SDISPEEAKA NDITVVPIPV IIGDKQYMDG IDITAEKLFE LERDGAPFPK
TSQPSPGTML ELCQKLKDEG YEAIIAIPLT SGISGFYNSL VNLAHTHPEF NLYPYDPAMT
VRSMGNLVLA AAKMIKNGWE PKEILAKLDE IRDTIDVLFV VDDLNNLVRG GRLSNASAFI
GTMLQIKPLL TFKKDDYQIV SFDKVRSMKR AVKKAENITI ERINNSPIKD NIALTVYNSN
YLEQATKVKD DFQAAFPNMT IKMFNFSSVI ATYLGEKSLG ITWMADIDKM DFSKK
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