| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0867 |
|---|
| Symbol | |
|---|
| ID | 4439909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | - |
|---|
| Start bp | 856705 |
|---|
| End bp | 858057 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639672723 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_814694 |
|---|
| Protein GI | 116629522 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00919336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATA ATAATTCTGT ACCTAAGAAA CTCTCCTTTA TATCAATATA TTTCTTAGGT
ATTAATGCGG TCATTGGATC AGGAACGTTC CTGCTACCTT CTGTAATTTA TCGTTACATG
AACTTAACAG CAATTCTTGT TCTTCTATGT ACTGCTGTCA CTGTCAGCAT GATTGCTTTG
TGCTATGCTG ACTTATCGAG CCGTTTTACA CAATCAGGAG CAGCATGGCT TTATTCTTAT
AATGCTTTTG GTCGCTTTGC TGGTTATGAG CTCGGCATTT TCACTTGGTT TTTAGGTTGC
ACAACTCTTT CAGCTGAAGT AGTAGCTTTG CTTACTGTCC TCAAGAGTTT TCTACCGATT
TTTAAAAATA ATGCTGTCTA TATTGGTAGT ATTATTTTCT TAATTTTATT GTTTTCAGTT
ATTAATTTCT TCGGTAGATC TTGGGTAAAA ATTGTCAATA ATATTTCAGC AGCCGCAAAG
ATAATTACTT TAATCGTCTT TATTATCGTC GGAGCTTTCT TTATTAAAAA AGCAAACTTC
ACTCCCGTAA TTCCACATGC GGCACTAACT GGTGTTACAC CATTTTTCAA ACATTTTGGC
GATGCATTTA CACCAATCTT TTATTTGTTT ACTGGCTTTT CATTTATTCC AATCGCTGCA
AAACAAATGA ACAATCCTGA AAAGAATATT CCTCGAGTTT TGATTGCCGT AATGACTAGT
GTCACAATTC TTGATTGCTT AATGCTTTTA GTAGCAATTG GCTTGAGTGG TCAAAAATTA
GGATCCTATT CTAATCCTCT AGCTAGTGCC TTAAAAACTG GCGTTGGTCA ATGGGGCTTT
GCCTTTATGA TCATTGGCAT GCTAATTTCA ATTTTTGGCG TTGCCTTTAG TGCTTCATTT
AATACTCCAT CATTAATTGC TTCTCTTGCT AATGAACATG GAATGTTGCC AAAATGGATT
GGAAAGAAAA ACAAGCATGA TGCACCTTGG GTAGGTATTA TTTTCACAGC AATTTTATCT
GCTGCATTGG CTACTCAAAG CTACCTCTTC CTTGTTTCAT GTACAGTTTT AGCATCATTT
GTTCAGTATG TGCCATCAAT TTTAGCCGTT ATCAAGTTTA AACACAGTAA TGAATATCCA
ACTCATGGCT TTTCTCTTCC TGGAAAATAT ACTGTTCCAA TTATTGCTTT AATTATTTCT
TGCTACATGG TAACTAATTT TACGCCTAAG ACATTGCTTT TAGGCGCGGT AGTTGCTGTA
CTTGCTGCTG CATGTTATTT CTTTATTGAT AAAGATGAAA AACTAGAAAA AGAGCATGAC
GACTTCTTAG CTAAGCTAAG ACATATAAAA TAA
|
|---|
| Protein sequence | MTNNNSVPKK LSFISIYFLG INAVIGSGTF LLPSVIYRYM NLTAILVLLC TAVTVSMIAL
CYADLSSRFT QSGAAWLYSY NAFGRFAGYE LGIFTWFLGC TTLSAEVVAL LTVLKSFLPI
FKNNAVYIGS IIFLILLFSV INFFGRSWVK IVNNISAAAK IITLIVFIIV GAFFIKKANF
TPVIPHAALT GVTPFFKHFG DAFTPIFYLF TGFSFIPIAA KQMNNPEKNI PRVLIAVMTS
VTILDCLMLL VAIGLSGQKL GSYSNPLASA LKTGVGQWGF AFMIIGMLIS IFGVAFSASF
NTPSLIASLA NEHGMLPKWI GKKNKHDAPW VGIIFTAILS AALATQSYLF LVSCTVLASF
VQYVPSILAV IKFKHSNEYP THGFSLPGKY TVPIIALIIS CYMVTNFTPK TLLLGAVVAV
LAAACYFFID KDEKLEKEHD DFLAKLRHIK
|
|---|
| |