| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0811 |
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| Symbol | nusA |
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| ID | 4439990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 793748 |
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| End bp | 795019 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639672668 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_814640 |
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| Protein GI | 116629468 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000010954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.00234388 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTTCTAG TCGCTTTGCA GTTGAATTTT AGAAAGGATG ATCAAAAACT TATGTCTAAA
GAAATGGTGG AAGCTTTTGC AACCTTAGAA AAAGAAAAAG GCATCAAGCA AGAAATTATT
GTTGATGCAA TTAAGGCTGC CTTAGTAGCT GCATATAAGA AAAATTATAA TCAAGCTCAA
AATGTTGAAG TTGTTTTTGA TGAAAAGAAG GGTAACTTCA AGGTTAATGC AATTAAGACA
GTTGTTGATG AAGTTCAAGA TAGTCGTCTT GAAGTAAGTC TTAAAGATGC ACTTGAAATT
AATCGTGCGT ATGAAGTTGG CGATGAAATT CGCTTTGAAG TAACTCCTAA AGATTTCGGT
CGTTTAGCTG CACAAACTGC TAAGCAAGTT ATTATGCAAC GTTTGCGTGA AGCTGAAAGA
GAACATATTA TTAGTGAATA TTCTCAATAT AAGGATGAAA TCGTTACTGG TACGGTTGAA
AGACGTGACA ATCGCTTTGT TTACGTAAAG ATCGGTAATG TTGAAGCCGT AATGACACAT
AATGATCAAT TACCAGGTGA AAATTACAAC CCTCAAGATA AAGTTCGTGT TTTAGTAACT
AGAGTAGGGT CAGATTCAAA AGGAGCTCAA ATTACAGTTT CTAGAACTGC ACCTGATTTA
GTAAAACGTC TCTTTGAACA AGAAGTTCCA GAAGTTTATG ATGGAACCGT TGAGATTGTA
TCAATTGCTC GTGAAGCTGG AGACAGAACT AAGATTGCAG TTAAGAGTAA TGATCCTGAT
ATTGATCCAG TTGGGACCTT AGTAGGACCA AAGGGTACTC GTGTTCAAAA TATTGTTAAT
GAATTAGGCG GAGAAAATAT CGACGTTGTA AAATACGAAG AGAATCCATC TGATTTTATT
GCCAACGCTT TGAATCCTGC AGAAGTAATT GCAGTTCAAT TTAGTGGTGA TGATGATGAC
AAGAATGCCC TAGTAATTGT TCCTGATTAC CAATTGTCTT TAGCTATCGG AAAACGTGGA
CAGAATGTTC GCCTTGCTGC TCGTTTGACA GGTTATAAGA TTGACATTAA GCCAGAATCT
CAAGTTGAGT TTGTCGATTC TGAAGGCGAT GACGTTGAAA CAGATCAAGA TATCGATGAT
AGTAATGTAT CAAATGAAGA AGCAACAGAA TCTACTGCTG AACAACTAGA AGAAGATTCA
AGCGAAGATT TTCCAAATGG GGAAGATGTT GATTCAGCAT TAGATGATGA TGCAGATAAA
GATGAGGAAT AG
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| Protein sequence | MLLVALQLNF RKDDQKLMSK EMVEAFATLE KEKGIKQEII VDAIKAALVA AYKKNYNQAQ
NVEVVFDEKK GNFKVNAIKT VVDEVQDSRL EVSLKDALEI NRAYEVGDEI RFEVTPKDFG
RLAAQTAKQV IMQRLREAER EHIISEYSQY KDEIVTGTVE RRDNRFVYVK IGNVEAVMTH
NDQLPGENYN PQDKVRVLVT RVGSDSKGAQ ITVSRTAPDL VKRLFEQEVP EVYDGTVEIV
SIAREAGDRT KIAVKSNDPD IDPVGTLVGP KGTRVQNIVN ELGGENIDVV KYEENPSDFI
ANALNPAEVI AVQFSGDDDD KNALVIVPDY QLSLAIGKRG QNVRLAARLT GYKIDIKPES
QVEFVDSEGD DVETDQDIDD SNVSNEEATE STAEQLEEDS SEDFPNGEDV DSALDDDADK
DEE
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