Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0486 |
Symbol | |
ID | 4440382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 513562 |
End bp | 514350 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639672344 |
Product | HAD superfamily hydrolase |
Protein accession | YP_814322 |
Protein GI | 116629150 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0954828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC TAATTGCCGT TGATATGGAT GGTACTTTCT TAAGAGACGA TAAAAGCTAT GATGAAGAAA AATTTGCGAA CATCTACCAA GAATTAGAAA AAAGAAATAT TATGTTCACA GTTGCTAGTG GTAATCAATA TTATCAAATT ACTACTTTTT TTAAGAACTT CCCTACTGTA ATTTATGTTG CAGAAAATGG CGCCTTAGTT AGAACCCAAG AAAAGATCTT AGCTCTGCAT GCTTTCTCTG AAGAAAGCGT TAAAAAGATT GAAGATTTTC TTTTAAAGCA AGCCGAATTG CAATTTTTAG TATCAGGAGT AGAGAGTGCC TACTTTCCGG TTCAATTCAC AGACGATTAT TACGAAATTT CTAATAAATA TTACTATCGC TTAAAGAAAA TACACGACTT TAGTGAAATT GATGACAAAA TTCTAAAATT TTCTATTTCT TGTCCTGATG AAAAAACAGC TTATTATGTT GATTTTCTAA AAAAGAGTCT TGGCGATTAC TGTAATGTAA CAAGCAGTGG TCATGGTGAT ATTGATCTTA TCTTACCAGG AATTCATAAG GCACATGGGT TAACAGAATT AGGTAAAGTA CTTGATATTC CTCTTTCTGA AATGACTGCT TTCGGTGACG GTGGCAATGA CTTAGAAATG ATTAAAGAAT TTGGTGATGG CGTGGCTATG TCAAATGCAA ATCCAGTGCT TTTTAAGGTC GCAGATCATA CAACAACATC AAACAATGAA CAAGGTGTTC TTACTTACAT TGAAAATAAT ATTCTCTAG
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Protein sequence | MTKLIAVDMD GTFLRDDKSY DEEKFANIYQ ELEKRNIMFT VASGNQYYQI TTFFKNFPTV IYVAENGALV RTQEKILALH AFSEESVKKI EDFLLKQAEL QFLVSGVESA YFPVQFTDDY YEISNKYYYR LKKIHDFSEI DDKILKFSIS CPDEKTAYYV DFLKKSLGDY CNVTSSGHGD IDLILPGIHK AHGLTELGKV LDIPLSEMTA FGDGGNDLEM IKEFGDGVAM SNANPVLFKV ADHTTTSNNE QGVLTYIENN IL
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