| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0347 |
|---|
| Symbol | |
|---|
| ID | 4440278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus gasseri ATCC 33323 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008530 |
|---|
| Strand | + |
|---|
| Start bp | 371424 |
|---|
| End bp | 372932 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639672206 |
|---|
| Product | gluconate kinase |
|---|
| Protein accession | YP_814191 |
|---|
| Protein GI | 116629019 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01314] gluconate kinase, FGGY type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.00095541 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATA TTATTGGAAT GGATATTGGC ACCACAGCGA GTAAGGGAGT CTTATATCAA
GAAAATGGTA AAAAGATTGC AGAGGCAACA ATTCCGTATC CCTTAATTCA AGAAAAAGTG
GATCAAGCTG AAGAAGATCC ACAAGTGATC TTTGATGCTG TTCAAAAGAT TATTTTCGAC
TTGAGCAAAA AAGTTTCTGG TAAAATTAGT GCAATTTCGT GGTCAAGCCA AATGCATAGC
TTAATTGGAC TTGGTAAAGA TAATCAATTA TTAACCAATA GTATTACTTG GGCTGATAAT
CGCAGTAGAG AAGTTGTAAC TACTGCAAAG AAGAGTGGAT TAGCTAACAG TATCTACCAA
CGAACCGGAA TGCCGCCTCA TCCAATGGCT CCTGTGTATA AGCTATTGTG GATTAAAGAA
GAACTTCCAG AGCTTTTTAC ACAGGTGCAA AAGTGGATTG GAATTAAAGA ATACATTATC
TGGCGCTTAA CTGGAAAAAT GATGACAGAT ATAACAATGG CAGCTGGGAC AGGCTTGTTG
AACCTAAAAA ATTTATCTTG GGATGAAGAT TTACTTAACC AAATTAATTT AGAAAAGGAA
AAACTGCCAA CCTTAGATAA GCCAGAGACA GTTGTGGAAG GAATAATCCC CAATTATATT
CAAAAACTAG GATTAAGTGA TCAGACAAAA ATCATTTTAG GTGCTAGTGA TGGCTATTTA
TCAACAATTG GAGTTGGAGT TTTAAATGAA AAATCTTTTG CTTTAAATGT TGGGACATCT
GGTGCTGTGA GAGTAATTGC GCCTGAAGTG GTAGTTGATT CAGAAAATCG CTTTTTTTGT
TATCCAGTGG ATAAGAAACA TTATCTATTG GGCGGACCAG TCAATAATGG CGGTATAGTA
TTTGAATGGG CTAGAAAGAC AATTTTCGGT CCTGATCAGA CCGCTGAAGA TTTTATCAAT
GTGGCAGAAA GTGTTCCTGC TGGAAGCAAT GGGTTGATCT TTCATCCTTA CTTAGGCGGA
GAACGGGCAC CAATTTGGAA TGCTCAAGCA CGTGGATCTT TTATTGGACT TACCAGAAAT
CACACTAAGC CGCAAATGGC TCGTAGTGTT TTAGAAGGAA TTGTTTTTAA TCTTTTGGGT
GCAGCTAGAG GCTTACGTGA AAAAATTGGT GAGCCAGATG CACTAAGAGT GACTGGTGGC
TTTGTAAAGA GTGACTTTGT AAGACAGTTG ATTGCCGATA TTTTTAACTT GCCAGTCATT
GTGATTAAAA ATGATCAAAG TGGAACCTTA GCGGCAATGT TTTTAGCACA AGTGGGGATG
AAAAAAGAGG CAGATTTAGA AAAAATCGCT AAGAAAATTG ATGGGAGCAA AATTTATTTT
CCTAATCCTA AAAATGTCGC AGTTTATCAA GACATCATTC CTATCTATCG TGAAGTTGAG
CATGATTTAG ATCAAAGTTA TGAAAAAATC GCCAGCTTTC AGGAAAAATA TCCTAAATTG
TTTGAATAA
|
|---|
| Protein sequence | MDYIIGMDIG TTASKGVLYQ ENGKKIAEAT IPYPLIQEKV DQAEEDPQVI FDAVQKIIFD
LSKKVSGKIS AISWSSQMHS LIGLGKDNQL LTNSITWADN RSREVVTTAK KSGLANSIYQ
RTGMPPHPMA PVYKLLWIKE ELPELFTQVQ KWIGIKEYII WRLTGKMMTD ITMAAGTGLL
NLKNLSWDED LLNQINLEKE KLPTLDKPET VVEGIIPNYI QKLGLSDQTK IILGASDGYL
STIGVGVLNE KSFALNVGTS GAVRVIAPEV VVDSENRFFC YPVDKKHYLL GGPVNNGGIV
FEWARKTIFG PDQTAEDFIN VAESVPAGSN GLIFHPYLGG ERAPIWNAQA RGSFIGLTRN
HTKPQMARSV LEGIVFNLLG AARGLREKIG EPDALRVTGG FVKSDFVRQL IADIFNLPVI
VIKNDQSGTL AAMFLAQVGM KKEADLEKIA KKIDGSKIYF PNPKNVAVYQ DIIPIYREVE
HDLDQSYEKI ASFQEKYPKL FE
|
|---|
| |