| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0321 |
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| Symbol | truA |
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| ID | 4440574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 349307 |
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| End bp | 350101 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639672180 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_814165 |
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| Protein GI | 116628993 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000566898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1.98611e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGACTA CGAGATATAA GTTGACAATG GCATATGATG GACACCTTTT TCATGGCTTT
CAAATTCAGC CAAACGAACG AACTGTGCAG GGCGTGATTG AAGAAGCTTT AAAAAAGATG
ACGAAGGGAA AAAGAGTAGT AGTGCATGGA TCTGGAAGAA CTGATGCTGG TGTTCATGCT
AAAGGTCAAG TTATCCACTT TGATTATCCG GGAAAAGAAA TCCCAGCTAA AAATATGATG
CTTGCTCTCA ATGCATTAAT GCCAATTGAT ACAGTTTTCT TTGATAGTGA AATTGTAGAT
TCTGATTTTC ACGTGCAATA TTCAACTAAG GGAAAATGGT ATCGGTATAT AGTTGATCAG
CACCGTTTTA CTGATCCTTT TAATCGGTTT TACACTGGAC ACTATCCATA TCCGTTAGAT
ATTGCTCTAA TGAAAAAGGC TGCTAAAGAT TTGATCGGAG AACATGATTT CACTAGTTTT
GCGGCAAGTG GTGGTCAAAT TGTTGATAAA GTGCGAACAA TTTATTATGT AAATATTACT
TCTGACCCAG ATAATAAAAA GATTATTTTT GATTTTATTG GCAATGGTTT TTTGTATAAC
ATGGTTAGAA TTTTAGTTGG TACTTTACTG GAAATTGGTA ATAAAAAACG TCCAGTTGAT
GATATACCGA GAGTTTTAGC AGCAAAAGAT CGACAAGAAG TTCGTACAAC AGCACCAGCC
AGTGGATTAT ACTTGCAACA TGTTTTTTAT GAAGAAGTTC CTAAAAAATA TCGATTAGAC
CTTAAAAAAG ATTGA
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| Protein sequence | MMTTRYKLTM AYDGHLFHGF QIQPNERTVQ GVIEEALKKM TKGKRVVVHG SGRTDAGVHA
KGQVIHFDYP GKEIPAKNMM LALNALMPID TVFFDSEIVD SDFHVQYSTK GKWYRYIVDQ
HRFTDPFNRF YTGHYPYPLD IALMKKAAKD LIGEHDFTSF AASGGQIVDK VRTIYYVNIT
SDPDNKKIIF DFIGNGFLYN MVRILVGTLL EIGNKKRPVD DIPRVLAAKD RQEVRTTAPA
SGLYLQHVFY EEVPKKYRLD LKKD
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