Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0034 |
Symbol | |
ID | 4440423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 32664 |
End bp | 33491 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639671896 |
Product | exonuclease III |
Protein accession | YP_813887 |
Protein GI | 116628715 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 107 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTAA TTTCATGGAA TATTGATTCG CTTAATGCTG CTTTAACTAG TGATTCAGCA CGTGCCAAGC TTACGCGCGG CGTTTTAAAT ACAATTAAAG AAAAAGATCC GGATATTATT GCCATTCAAG AAACTAAGTT ACGGTCAACT GGTCCGACTA AAAAGCATCA AGAAATTTTG GCTGAAATGT TTCCTGATTA TGATTATGTT TGGCGTTCTT CTGAAGAACC TGCACGAAAA GGTTATGCTG GGACAATGTT TTTATATAAA AATACTCTCG CTCCTGAAGT AACTAAGCCA GTAATTGGGG CTCCAGAACC AATGGATCAT GAAGGTCGAA TTCTAACTTT AGAGTTTGAT AACTACTACG TTACCCAGGT TTATACGCCA AACTCTGGGA ATGAATTGAA GCGATTAGAT GATCGTCAAG TTTGGGATGA AAAGTATACA GAATATTTAC AAAAACTAGA TCAAAACAAA CCTGTGATTG CTAGTGGTGA TTATAACGTT GCTCATACGC CAATTGATTT GAAGCATCCA GAAAGTAATC ATCATAACGC TGGTTTTACT GATGAAGAGC GACAAGACTT TGATAAGTTG CTTAAGCTTG GTTTTACTGA TACATTTAGA AAAGTTCATG GTAACGTCGA AGGGGTTTAT TCTTGGTGGG CTCAAAGAGT TAGGACCAGC AAGGCTAATA ATTCGGGCTG GAGAATTGAT TATTACATCG TGTCTAATAG AATTGCTGAT CAGGTAACTA AGTCAGAAAT GCTTGATACT GGCGAGCGAA AAGACCATTG TCCAATTATG TTAGAAATTA ATTTATAA
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Protein sequence | MRLISWNIDS LNAALTSDSA RAKLTRGVLN TIKEKDPDII AIQETKLRST GPTKKHQEIL AEMFPDYDYV WRSSEEPARK GYAGTMFLYK NTLAPEVTKP VIGAPEPMDH EGRILTLEFD NYYVTQVYTP NSGNELKRLD DRQVWDEKYT EYLQKLDQNK PVIASGDYNV AHTPIDLKHP ESNHHNAGFT DEERQDFDKL LKLGFTDTFR KVHGNVEGVY SWWAQRVRTS KANNSGWRID YYIVSNRIAD QVTKSEMLDT GERKDHCPIM LEINL
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