Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0002 |
Symbol | |
ID | 4439758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 1681 |
End bp | 2811 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639671864 |
Product | DNA polymerase sliding clamp subunit |
Protein accession | YP_813857 |
Protein GI | 116628685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000000188302 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.4129e-28 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCAGTTTA CAATTAATCG TAATTTATTC CTCGAAAACC TAAATAATGT AATGCGTGCA ATTTCTTCAC GTGCAACTAT TCCAATTTTA AGTGGTATAA AACTTAACCT TACTGATGAG ATGCTAACTT TAACCGGTAG TGACACTGAC ATTTCGATCG AAATTCAGAT TCCTGTAAAC GATGATCTAG TTGTTCAATC TACAGGTTCG ATTGTTTTAC CTGCACGCTT TTTTAGTGAG ATCGTTAAAA AATTACCTGG TAAAGACTTT TCATTTGAAG TAAGAGAAAG CTTCCAGACT AAAATTGTTT CTGAAAATAC TGAATTTATG ATCAATGGCT TGGATGCAAA TAACTATCCT CATCTACCAG AAATTTCTAC TGATGCCTCA TTTAAGATTT CAGGTAAAAC TTTTAGAGAA ATTATTAATG AAACTGTTTT TGCTGTTGCT ACTCAAGAAA GTCGTCCTAC TTTAACAGGT GTTAATTTCA TTTTTAATAA CTCATCAATT AAGGCAGTTG CTACCGACAG TCACCGTTTA TCACAGCGTC AAATTTCTTT AGAAAACGGC CCACAAACTA GTACTGACTT AATAATTCCA GGAAAGAGTT TAGTAGAATT AGCTAGAATT ATTGGTGAAA ACGATCCTGA AATTACAGTA AATCCAGGTG AGAACCAAGT TTTATTTGAA GTCGGAAATA TTGCATTCTA TTCCCGTTTG CTTGATGGTC AATATCCAGA TACTGATCGT TTAATTCCAA CTGAATCTAC TACTTCTGTT GAATTTGAAC TGCCAGTTTT AGCTAGGTCT CTAGAACGTG CAAGTCTTCT TACGCATGAA AGTCGAAATA ACGTAGTAAA AATGACTCTT GATGTTCAAA ATCAATTAGT TAAGCTTCAA GGTGATTCTC CAGAGATAGG TAATGTGGAA GAAGAAATTA GTTTTAAGAA GCTTGAAGGC GAAGGTTTGA CAATTTCATT TAACCCTGAC TATTTAAGAG AGGCTTTGCG CGCATCAATT ACTGATTCCA TTATTATGAA CTTTACGCAG CCATTGAGAC CATTTACAGT TGTACCTGCA AAGCAGGATG TCAACTTTAC GCAACTGATT ACTCCAGTGA GAACATTTTA A
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Protein sequence | MQFTINRNLF LENLNNVMRA ISSRATIPIL SGIKLNLTDE MLTLTGSDTD ISIEIQIPVN DDLVVQSTGS IVLPARFFSE IVKKLPGKDF SFEVRESFQT KIVSENTEFM INGLDANNYP HLPEISTDAS FKISGKTFRE IINETVFAVA TQESRPTLTG VNFIFNNSSI KAVATDSHRL SQRQISLENG PQTSTDLIIP GKSLVELARI IGENDPEITV NPGENQVLFE VGNIAFYSRL LDGQYPDTDR LIPTESTTSV EFELPVLARS LERASLLTHE SRNNVVKMTL DVQNQLVKLQ GDSPEIGNVE EEISFKKLEG EGLTISFNPD YLREALRASI TDSIIMNFTQ PLRPFTVVPA KQDVNFTQLI TPVRTF
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