Gene LEUM_1479 details

Gene Information

• Locus tag: LEUM_1479
• Symbol: rimM
• ID: 4423209
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
• Kingdom: Bacteria
• Replicon accession: NC_008531
• Strand: -
• Start bp: 1473072
• End bp: 1473593
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639675174
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_818944
• Protein GI: 116618573
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAATA CAGAAAATTA TTTTAAAGTT GGCACAATTG TAAACACACA TGGTATTCGT 
GGTGAAGTGA AAATCATGGC GATTACTGAT TTTGCTCAAG ATCGCTTCAA AAAGGGAGCA 
GATCTATTTA TTGATACAAA ACAGGGACGT ATCCCTGTCA AAGTGCAATC ATCACGACTA 
CATAAAAACA TGTGGTTGGT TTTATTTGTT GGCGTAACCA ACATTAATGA AATTGAAAAA 
TATAAAGGTG ATGATGTTTA TATTGAAGGT ACAGCTCGTC CAGAATTAGA AGACGATCAG 
TACTATTACG ATGAAATTAT CGATAGCACT GTGGTTGATT TGGATGGTAA CAAAATCGGT 
GTTGTCAAGG AAATTATGGA AACAGGAGCG AATGATGTTT GGATAGTTCA ACGTGACGGT 
CAATCAGATG CCTTGATTCC TATGATTGAT GATGTTGTTA AATCAGTTGA TGTTGACGCC 
AAATTAATTA CAATTGACGC TTTAGAAGGG TTATTAGATT AA 

 

Protein sequence

MTNTENYFKV GTIVNTHGIR GEVKIMAITD FAQDRFKKGA DLFIDTKQGR IPVKVQSSRL 
HKNMWLVLFV GVTNINEIEK YKGDDVYIEG TARPELEDDQ YYYDEIIDST VVDLDGNKIG 
VVKEIMETGA NDVWIVQRDG QSDALIPMID DVVKSVDVDA KLITIDALEG LLD