| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1283 |
|---|
| Symbol | |
|---|
| ID | 4423031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1270271 |
|---|
| End bp | 1272463 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639674979 |
|---|
| Product | transcriptional accessory protein |
|---|
| Protein accession | YP_818753 |
|---|
| Protein GI | 116618382 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAT TAATACAACA TGAGCCAACG CAAGACGTTA TTGCGCAAAG TGTTGCGGCT
AAAGTAACGA ATATAACTAA AAAGCAAATT AATGCTACAC TAACCTTGCT TAACGAAGGA
TCAACTGTCC CTTTCATCGC CAGATATCGA AAAGAAATGA CGGGTGAACT GGATGAAGTA
CAGATTCGTG ATATCCAATC TATTGCAAAA AGGTCAAAAG AGTTAGTAGA ACGAAAAAAT
ACAGTTTTGA AAGCCATTTT TGAACAACGC AAATTGACTG ATGCTTTGCA AAAGAGTATT
CAAGACGTTC AGACGCTTCA GGAACTAGAA GATATATATT TACCATATAA ACAAAAACGT
CGGACCAGAG CGATGGTTGC ACGAGAAAAT GGTCTGCAAC CACTTGCCGA CTGGTTAATG
ACGCATATTA ATAGTAATAT TGATGATGAT TTTCGAAATT ACGTTAATGA AGCTTTACCA
ACTATGGTCG ATGTGCGTGC AGGAGTGCAT GAAATTTTGG CTGAACAAAT CGGTGAAAAT
GCTAATTATC GTCAATGGCT ACGCTTGAGA ATGGCTGTAG ATGGGTTGTT GGTTTCTAGC
TTAAAGCGTG GTATGGCTGG AAAAGATGAG CAAAAAGTTT ACGAGCAATA TTACGATTTT
ACTGAAACAA TTAAATCACT TCTCAACAAT AAATTTCGTA TTTTAGCAGT GAACAGAGGT
GAAAAAGAGG GCATATTATC AGTGAAAATT GATTTTTCTG AGGCGCGTAT GATGCACTTT
ATTCAAACGA AAGAGTTGAA CGGGCAAAAT CCGACAGGCC AAGGATATGA GATATTACAA
CGTGCCATTG AAGATGCTTA TAAACGTTTT ATTCGTCCAG CAGTCGAAAG AGAAATTAGA
CAAGAATTGA CAACCCAAGC ACAAGAGCAA GCCATTAAGG TATTTGGTGA CAATCTTTAT
CATCTTTTGA TGCAAGCACC GCTGAAGAAT AAAATTGTGA TGGGTTTTGA TCCAGGATTT
CGTACAGGAT CAAAATTAGC AATTATTGAC AGCAATGGCA AGTTTTTAGC TAAGCAGGTT
ATCTATCCGC ATAAACCAGC TAATGTGCAG AAACGGTCCG AAGCAATTAA CACTTTCAAA
CAATTGGTAT CAGATTACAA GGTAGAGCTG GTAGCAATTG GGAATGGCAC AGCGTCTCGT
GAATCTGAAG AGTTTGTTGC GGAAAATTTG CCAGCCGGTG TAAAGTATAC CATTGTCAAC
GAAGCGGGCG CTTCAGTCTA TTCTGCTTCC GAGCAGGCGC GGGAAGAATT TCCTGATTTA
CACGTGGAAG AGCGCAGTGC GATTTCTATT GGGCGCAGGA TTCAGGACCC GTTAGCTGAA
TTAATCAAGA TTGATCCAAA GTCCGTTGGT GTTGGTCAAT ATCAGCATGA TTTGAATGCA
AAAACACTAG ATGAACAAGT AGACAACGTT GTTGAAACAG CAGTTAACCA AGTTGGGGTT
AATTTAAATA CAGCCTCACC TGCGTTATTA GCTCACATTG CCGGCCTAAA TAAGAATTTG
GCTCAAAATA TCGTTAATTA TCGAAACGAC TTTGGTGAAT TTACATCACG TACACAAATC
AAGAAAGTAC CACGTTTAGG ACCTAAAGCG TATGAACAGG CTGCTGGATT TTTACGTATT
GAGGATGGTA AGAATATATT AGATAACACG GATATTCATC CAGAAAGTTA TACCGCTGCT
AAAAAGTTAT TGTCATTAGC AAACATAAAC CCAGTAAACT TAGCGACAGA TGAAGCTAAT
ACGGTATTGA ACCGATTAGA TAATGAGCAC ACAGCGGAAC AATTAGATGT TGGTATACAA
ACGTTGCATG ATATGATTAT GAGCTTACAA AAGCCGGGAC GAGATGGTCG TTCAGAAATG
GTAGGGGCAT TGCTAAAATC TGATGTTATG CACATTGAAG ATTTGAAAGC AGGTATGAAA
CTACAAGGTA CCGTTCGCAA TGTTGTGGAT TTTGGTGCAT TTGTGGATCT GGGCGTCAAA
CACGATGGAC TTGTGCATAT TTCTAGAATA AGTACACGTC GTATTAAACA TCCATCTGAA
ATTGTATCTG TTGGTGATAT TGTTGAGGTC TGGATTGTTG ATGTTGATGA AAAAAGAAAT
CGCATTGGAT TAACCATGTT GGCGCCGCAA TAA
|
|---|
| Protein sequence | MTELIQHEPT QDVIAQSVAA KVTNITKKQI NATLTLLNEG STVPFIARYR KEMTGELDEV
QIRDIQSIAK RSKELVERKN TVLKAIFEQR KLTDALQKSI QDVQTLQELE DIYLPYKQKR
RTRAMVAREN GLQPLADWLM THINSNIDDD FRNYVNEALP TMVDVRAGVH EILAEQIGEN
ANYRQWLRLR MAVDGLLVSS LKRGMAGKDE QKVYEQYYDF TETIKSLLNN KFRILAVNRG
EKEGILSVKI DFSEARMMHF IQTKELNGQN PTGQGYEILQ RAIEDAYKRF IRPAVEREIR
QELTTQAQEQ AIKVFGDNLY HLLMQAPLKN KIVMGFDPGF RTGSKLAIID SNGKFLAKQV
IYPHKPANVQ KRSEAINTFK QLVSDYKVEL VAIGNGTASR ESEEFVAENL PAGVKYTIVN
EAGASVYSAS EQAREEFPDL HVEERSAISI GRRIQDPLAE LIKIDPKSVG VGQYQHDLNA
KTLDEQVDNV VETAVNQVGV NLNTASPALL AHIAGLNKNL AQNIVNYRND FGEFTSRTQI
KKVPRLGPKA YEQAAGFLRI EDGKNILDNT DIHPESYTAA KKLLSLANIN PVNLATDEAN
TVLNRLDNEH TAEQLDVGIQ TLHDMIMSLQ KPGRDGRSEM VGALLKSDVM HIEDLKAGMK
LQGTVRNVVD FGAFVDLGVK HDGLVHISRI STRRIKHPSE IVSVGDIVEV WIVDVDEKRN
RIGLTMLAPQ
|
|---|
| |