| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LEUM_1231 |
|---|
| Symbol | |
|---|
| ID | 4422996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008531 |
|---|
| Strand | - |
|---|
| Start bp | 1225390 |
|---|
| End bp | 1226595 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639674928 |
|---|
| Product | major facilitator superfamily permease |
|---|
| Protein accession | YP_818702 |
|---|
| Protein GI | 116618331 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.200492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGCAAA TCAAAAGTGA ACAAAGAATT AGAAATTTCA AGATAGCATG GATAGGAACA
TTTATGGCGG GCATGGCATT TAGTGAAGCC ATGCCTTTTT TGGCTCTTTA TATCATGCAA
ATTAGTCATT TTAATCAGGC ACAAGTTAGT TTTTATGCCG GTATTTCATA TGCGGCTTCG
TATTTAGTAG TGATATTAGT CTCACCAATT TGGGGTAAAA TTGCAGACCA ACACGGGCGA
AAACCAATGC TGCTTCGCAC AGCGGCGGGG ATGGGGATTG TAATCATCTT ATTGAGTTGT
GTGACGAATA TTTGGCAGAT TATTATTCTC CGTCTTTGTC AAGGGCTTTT TGATGGTTAT
ACACCCAGTG TAATTGCCTT AATTGCTGCT GAAACGCCAC TTGAGGAGCG ATCCGTAGTG
ATTAGTAAAT TGTCCACCGG ATATATTATT GGTGGGTTAA TGGGCCCGCT AATTGGCGGC
GTACTCGCTA CAATATTTAG CATTAGAATG ACTTTTTTTA TTACGGGTAT AATTTTGTTA
TGCGTAGCTT TCATCAGTTT TTATGGTATT CAGGAAAACT TTCAGAAAAT CAATACAAGT
CCGACCGAAA AGTTAGTCTC ATCTAAAAAG GAAAGCGTTT GGACTGTGCC AATCTTAATA
TTGCTCAGTG CTACCATGCT AATTCAGTTT GTAGAGAGTG CCATAATTCC TTATGTTAGT
TTGATGATTA AAGATTTGTT ATTTTCAGAG CATTATTTGA CTATCATGAC GGGTATTGTT
TCTGCTTTGC CAGGTGTCGC AACAGCTGTA TTTGCAACCT TTGTTGGTAA AATGAGTAGC
CATTTTGGTA CTTTAAAAAT ACTTAAATTG TGTGAACTTG CAGCAATAAT AATTTATGCT
TTGCTTGGTA TGACCACCAG TTTAATGTTT TTTGCAGGAC TAAGATTTTT AATTGGAATT
GCTAACGCTG GTATGACGCC AATGATACAA GTATTATTGT CAAAAGCTAG TAATCGATTG
AGTACGGTTT TTAGTATGAG TTTATCGGCA CAATCACTTG GTAGTTTAGC TGGATCTATT
CTTGGTGCAT ACCTGAGTCA ATTTATGCCG TTGAATAATC TATTTTACAT TGCTAGTGGT
GCCTTAATGA TCAGTTACGT ATTATTGAAG AAAGGAGAAC TGGACAATTC AACGGCTCCT
ACATAA
|
|---|
| Protein sequence | MGQIKSEQRI RNFKIAWIGT FMAGMAFSEA MPFLALYIMQ ISHFNQAQVS FYAGISYAAS
YLVVILVSPI WGKIADQHGR KPMLLRTAAG MGIVIILLSC VTNIWQIIIL RLCQGLFDGY
TPSVIALIAA ETPLEERSVV ISKLSTGYII GGLMGPLIGG VLATIFSIRM TFFITGIILL
CVAFISFYGI QENFQKINTS PTEKLVSSKK ESVWTVPILI LLSATMLIQF VESAIIPYVS
LMIKDLLFSE HYLTIMTGIV SALPGVATAV FATFVGKMSS HFGTLKILKL CELAAIIIYA
LLGMTTSLMF FAGLRFLIGI ANAGMTPMIQ VLLSKASNRL STVFSMSLSA QSLGSLAGSI
LGAYLSQFMP LNNLFYIASG ALMISYVLLK KGELDNSTAP T
|
|---|
| |